RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 PHF13Q86YI8 300 aaPredicted RBP12.87□□□□□ -0.35
USP1-203ENST00000442679 BBS7Q8IWZ6 715 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 DEFB106AQ8N104 65 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 CPA6Q8N4T0 437 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 FLCNQ8NFG4 579 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 DQX1Q8TE96 717 aaKnown RBP12.87□□□□□ -0.35
USP1-203ENST00000442679 PLD4Q96BZ4 506 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 SLC2A13Q96QE2 648 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 C11orf70Q9BRQ4 267 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 DCLK3Q9C098 648 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 C8orf33Q9H7E9 229 aaPredicted RBP12.87□□□□□ -0.35
USP1-203ENST00000442679 ECT2Q9H8V3 914 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 C11orf16Q9NQ32 467 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 ADAM22Q9P0K1 906 aa12.87□□□□□ -0.35
USP1-203ENST00000442679 OTOL1A6NHN0 477 aaPredicted RBP12.86□□□□□ -0.35
USP1-203ENST00000442679 TMCO5BA8MYB1 307 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 MAN2B1O00754 1011 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 MSI1O43347 362 aaKnown RBP12.86□□□□□ -0.35
USP1-203ENST00000442679 KLKB1P03952 638 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 CALB1P05937 261 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 CD72P21854 359 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 CORO1AP31146 461 aaKnown RBP12.86□□□□□ -0.35
USP1-203ENST00000442679 SCNN1AP37088 669 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 HARS2P49590 506 aaKnown RBP12.86□□□□□ -0.35
USP1-203ENST00000442679 MLLT6P55198 1093 aaPredicted RBP12.86□□□□□ -0.35
USP1-203ENST00000442679 TBX4P57082 545 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 CDK17Q00537 523 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 PTP4A2Q12974 167 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 TRIP4Q15650 581 aaPredicted RBP12.86□□□□□ -0.35
USP1-203ENST00000442679 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
USP1-203ENST00000442679 TDRD12Q587J7 1177 aaKnown RBP12.86□□□□□ -0.35
USP1-203ENST00000442679 ZNF852Q6ZMS4 543 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 BMP8AQ7Z5Y6 402 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 OR8K1Q8NGG5 319 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 OLIG1Q8TAK6 271 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 ADAM32Q8TC27 787 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 OTUB2Q96DC9 234 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 TBC1D17Q9HA65 648 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 ZNF510Q9Y2H8 683 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 MYO16Q9Y6X6 1858 aa12.86□□□□□ -0.35
USP1-203ENST00000442679 KANSL1LA0AUZ9 987 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 SPECC1L-ADORA2AF8WAN1 911 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 DDX3XO00571 662 aaKnown RBP eCLIP12.85□□□□□ -0.354e-11■■■■■ 43.8
USP1-203ENST00000442679 DAB1O75553 588 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 TRUB2O95900 331 aaKnown RBP12.85□□□□□ -0.35
USP1-203ENST00000442679 CYP17A1P05093 508 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 HNRNPH3P31942 346 aaKnown RBP12.85□□□□□ -0.35
USP1-203ENST00000442679 GJA4P35212 333 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 NOS2P35228 1153 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 MATKP42679 507 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 ADKP55263 362 aaKnown RBP12.85□□□□□ -0.35
USP1-203ENST00000442679 AMPD2Q01433 879 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 TBX2Q13207 712 aaPredicted RBP12.85□□□□□ -0.35
USP1-203ENST00000442679 DHCR24Q15392 516 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 PPP1R2P3Q6NXS1 205 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 RHBDF2Q6PJF5 856 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 Q6ZNB5 142 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 TAC4Q86UU9 113 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 RALGPS2Q86X27 583 aaPredicted RBP12.85□□□□□ -0.35
USP1-203ENST00000442679 DENND1CQ8IV53 801 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 DRC7Q8IY82 874 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 FAM3CQ92520 227 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 MSANTD3Q96H12 275 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 MRFAP1L1Q96HT8 127 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 SERPINB11Q96P15 392 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 DNAJC7Q99615 494 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP1-203ENST00000442679 DDX23Q9BUQ8 820 aaKnown RBP12.85□□□□□ -0.35
USP1-203ENST00000442679 FAM204AQ9H8W3 233 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
USP1-203ENST00000442679 TAS2R14Q9NYV8 317 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP1-203ENST00000442679 WDR35Q9P2L0 1181 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 AGO1Q9UL18 857 aaKnown RBP12.85□□□□□ -0.35
USP1-203ENST00000442679 TLR6Q9Y2C9 796 aa12.85□□□□□ -0.35
USP1-203ENST00000442679 SYNJ2BP-COX16A0A087WUM0 186 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 SHISA7A6NL88 538 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 FAM170BA6NMN3 283 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 AKR1B15C9JRZ8 316 aaPredicted RBP12.84□□□□□ -0.35
USP1-203ENST00000442679 MFAP3LO75121 409 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 ADH1CP00326 375 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 IGLV3-27P01718 113 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 FTLP02792 175 aaPredicted RBP12.84□□□□□ -0.35
USP1-203ENST00000442679 PLEKP08567 350 aaPredicted RBP12.84□□□□□ -0.35
USP1-203ENST00000442679 GZMAP12544 262 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 GBP1P32455 592 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 CTHP32929 405 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 PITX1P78337 314 aaPredicted RBP12.84□□□□□ -0.35
USP1-203ENST00000442679 RING1Q06587 406 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 NNTQ13423 1086 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 UBXN2BQ14CS0 331 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 LY6G5CQ5SRR4 150 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 C1orf228Q6PIY5 440 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 MON1BQ7L1V2 547 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 TMEM25Q86YD3 366 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 UNC45BQ8IWX7 931 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 MCOLN2Q8IZK6 566 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 FBXL6Q8N531 539 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms