RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TBCBQ99426 244 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 C11orf84Q9BUA3 381 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MMADHCQ9H3L0 296 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 EBF2Q9HAK2 575 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SPG21Q9NZD8 308 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MRPL42Q9Y6G3 142 aaKnown RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 TSC2P49815 1807 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 TCRBV7S2A1N4TA0A589 114 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 RNF40O75150 1001 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 PHF2O75151 1096 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 ERLIN1O75477 346 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 GJB5O95377 273 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 CHRNA3P32297 505 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SULT1E1P49888 294 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 IRAK1P51617 712 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SLC5A3P53794 718 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 HDAC4P56524 1084 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MRPS25P82663 173 aaKnown RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 CCDC15Q0P6D6 951 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 CASP8Q14790 479 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 PSMD5Q16401 504 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 TSNAXIP1Q2TAA8 658 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 B4GALNT4Q76KP1 1039 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 RNF168Q8IYW5 571 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 KCTD6Q8NC69 237 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 CMASQ8NFW8 434 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 HSPH1Q92598 858 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 CENPIQ92674 756 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 RSRC1Q96IZ7 334 aaKnown RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 C8orf48Q96LL4 319 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 SLC2A13Q96QE2 648 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 ZBED2Q9BTP6 218 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 TRIM62Q9BVG3 475 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 TRPV5Q9NQA5 729 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 AAASQ9NRG9 546 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 CHST7Q9NS84 486 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 MTRRQ9UBK8 725 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 DMGDHQ9UI17 866 aaKnown RBP8.41□□□□□ -1.06
CCDC39-201ENST00000442201 BACE2Q9Y5Z0 518 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 CDY1Q9Y6F8 540 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 USP3Q9Y6I4 520 aa8.41□□□□□ -1.06
CCDC39-201ENST00000442201 ENO4A6NNW6 628 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 TJP3O95049 919 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 SOD2P04179 222 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 TFE3P19532 575 aaPredicted RBP8.4□□□□□ -1.06
CCDC39-201ENST00000442201 PPM1AP35813 382 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 PAPOLAP51003 745 aaKnown RBP8.4□□□□□ -1.06
CCDC39-201ENST00000442201 SLC7A5Q01650 507 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 RAB6CQ53S08 254 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 TFDP3Q5H9I0 405 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 WDR93Q6P2C0 686 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 RSPO2Q6UXX9 243 aaPredicted RBP8.4□□□□□ -1.06
CCDC39-201ENST00000442201 HFE2Q6ZVN8 426 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 ZDHHC14Q8IZN3 488 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 COLGALT1Q8NBJ5 622 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 FBXO22Q8NEZ5 403 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 C2orf15Q8WU43 125 aaKnown RBP8.4□□□□□ -1.06
CCDC39-201ENST00000442201 HDAC7Q8WUI4 952 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 TEKT4Q8WW24 435 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 RUBCNQ92622 972 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 PEBP4Q96S96 227 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 NPY6RQ99463 290 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 RAB6CQ9H0N0 254 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 STIM2Q9P246 746 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 AMACRQ9UHK6 382 aa8.4□□□□□ -1.06
CCDC39-201ENST00000442201 MTMR11A4FU01 709 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 TNFRSF10BO14763 440 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 RAD51CO43502 376 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 NCAM1P13591 858 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 KRT10P13645 584 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 KDELR1P24390 212 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 PTPN7P35236 360 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 CDKN2BP42772 138 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 IFRD2Q12894 506 aaPredicted RBP8.4□□□□□ -1.07
CCDC39-201ENST00000442201 KLF1Q13351 362 aaPredicted RBP8.4□□□□□ -1.07
CCDC39-201ENST00000442201 SIX1Q15475 284 aaPredicted RBP8.4□□□□□ -1.07
CCDC39-201ENST00000442201 CYP1B1Q16678 543 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 DDR2Q16832 855 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 TMEM240Q5SV17 173 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 KAZNQ674X7 775 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 SLC8B1Q6J4K2 584 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 BZW1Q7L1Q6 419 aaKnown RBP8.4□□□□□ -1.07
CCDC39-201ENST00000442201 MAP7D3Q8IWC1 876 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 SCAMP5Q8TAC9 235 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 NT5C3BQ969T7 300 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 DTNBP1Q96EV8 351 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 RUNDC3BQ96NL0 473 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 HERPUD2Q9BSE4 406 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 HTATIP2Q9BUP3 242 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 VN1R3Q9BXE9 311 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.4□□□□□ -1.07
CCDC39-201ENST00000442201 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.4□□□□□ -1.07
CCDC39-201ENST00000442201 RRN3Q9NYV6 651 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 NAALADL1Q9UQQ1 740 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 EFR3BQ9Y2G0 817 aa8.4□□□□□ -1.07
CCDC39-201ENST00000442201 hCG_1818297A0A087WSY0 165 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 A6NHS1 94 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 M0QYT0 321 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 C2CD2LO14523 706 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 EIF3HO15372 352 aaKnown RBP eCLIP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms