RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 SYNJ2BP-COX16A0A087WUM0 186 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 OR4Q2P0C623 313 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 NCAM1P13591 858 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 NME3Q13232 169 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 TRIM60Q495X7 471 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 SLC39A12Q504Y0 691 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 DENND2CQ68D51 928 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 NPAS4Q8IUM7 802 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 UNC45BQ8IWX7 931 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 TACO1Q9BSH4 297 aaKnown RBP15.5■□□□□ 0.07
IFT140-204ENST00000439987 ZCWPW1Q9H0M4 648 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 PIGVQ9NUD9 493 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 COX16Q9P0S2 106 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 TPX2Q9ULW0 747 aaKnown RBP15.5■□□□□ 0.07
IFT140-204ENST00000439987 USP3Q9Y6I4 520 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 GOLGA6L10A6NI86 522 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 ALDH2P05091 517 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 CYP2C18P33260 490 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 EIF3BP55884 814 aaKnown RBP15.5■□□□□ 0.07
IFT140-204ENST00000439987 ROR1Q01973 937 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 SLC29A2Q14542 456 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 VARS2Q5ST30 1063 aaKnown RBP15.5■□□□□ 0.07
IFT140-204ENST00000439987 ZC3H18Q86VM9 953 aaKnown RBP15.5■□□□□ 0.07
IFT140-204ENST00000439987 SPATS2Q86XZ4 545 aaKnown RBP15.5■□□□□ 0.07
IFT140-204ENST00000439987 DCP1BQ8IZD4 617 aaKnown RBP15.5■□□□□ 0.07
IFT140-204ENST00000439987 CSPG4P5Q96PW8 444 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 SLC9A7Q96T83 725 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 RRN3Q9NYV6 651 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 HEY1Q9Y5J3 304 aa15.5■□□□□ 0.07
IFT140-204ENST00000439987 MYZAPP0CAP1 466 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 STIP1P31948 543 aaKnown RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 DARS2Q6PI48 645 aaKnown RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 TRMT10CQ7L0Y3 403 aaKnown RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 PYROXD2Q8N2H3 581 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 FAM71DQ8N9W8 422 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 PGAP3Q96FM1 320 aaPredicted RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 COLEC11Q9BWP8 271 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 MRPL9Q9BYD2 267 aaKnown RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 NDC80O14777 642 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 RIPK2O43353 540 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 ZFXP17010 805 aaPredicted RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 GRIK1P39086 918 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 CCT5P48643 541 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 SLC11A1P49279 550 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 IFFO1Q0D2I5 559 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 MORF4L2Q15014 288 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 FAM171A1Q5VUB5 890 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 C1orf53Q5VUE5 145 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 DEFB128Q7Z7B8 93 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 ZCCHC9Q8N567 271 aaKnown RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 ADAM32Q8TC27 787 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 CAPS2Q9BXY5 557 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 GPR62Q9BZJ7 368 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 FOXP3Q9BZS1 431 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 CDC42EP4Q9H3Q1 356 aaKnown RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 TMBIM4Q9HC24 238 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 WDR6Q9NNW5 1121 aaKnown RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 MARCH5Q9NX47 278 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 RCOR3Q9P2K3 495 aaPredicted RBP15.49■□□□□ 0.07
IFT140-204ENST00000439987 HCSTQ9UBK5 93 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 PATJQ8NI35 1801 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 VWA8A3KMH1 1905 aa15.49■□□□□ 0.07
IFT140-204ENST00000439987 H7C0C1 242 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 HNRNPH1P31943 449 aaKnown RBP15.48■□□□□ 0.07
IFT140-204ENST00000439987 ARL4AP40617 200 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 ATP5OP48047 213 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 MNAT1P51948 309 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 NFE2Q16621 373 aaPredicted RBP15.48■□□□□ 0.07
IFT140-204ENST00000439987 UBAP2Q5T6F2 1119 aaKnown RBP15.48■□□□□ 0.07
IFT140-204ENST00000439987 RNASEH2BQ5TBB1 312 aaKnown RBP15.48■□□□□ 0.07
IFT140-204ENST00000439987 BSPRYQ5W0U4 402 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 B4GALNT4Q76KP1 1039 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 GPATCH11Q8N954 259 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 SCAMP5Q8TAC9 235 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 EDEM1Q92611 657 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 PWWP2AQ96N64 755 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 TBKBP1A7MCY6 615 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 SHBGP04278 402 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 GOT1P17174 413 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 RPL22P35268 128 aaKnown RBP15.48■□□□□ 0.07
IFT140-204ENST00000439987 SLC5A3P53794 718 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 AIF1P55008 147 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 MRPL58Q14197 206 aaKnown RBP15.48■□□□□ 0.07
IFT140-204ENST00000439987 KCTD16Q68DU8 428 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 CEP57Q86XR8 500 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 FUBP3Q96I24 572 aaKnown RBP eCLIP15.48■□□□□ 0.07
IFT140-204ENST00000439987 ATP6V1G3Q96LB4 118 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 TMPRSS4Q9NRS4 437 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 DNAJC17Q9NVM6 304 aaKnown RBP15.48■□□□□ 0.07
IFT140-204ENST00000439987 DDIT4Q9NX09 232 aa15.48■□□□□ 0.07
IFT140-204ENST00000439987 ABI2Q9NYB9 513 aaPredicted RBP15.48■□□□□ 0.07
IFT140-204ENST00000439987 SF3B1O75533 1304 aaKnown RBP eCLIP15.48■□□□□ 0.076e-6■■■■■ 117.3
IFT140-204ENST00000439987 TNFRSF10BO14763 440 aa15.47■□□□□ 0.07
IFT140-204ENST00000439987 EIF3HO15372 352 aaKnown RBP eCLIP15.47■□□□□ 0.07
IFT140-204ENST00000439987 F9P00740 461 aa15.47■□□□□ 0.07
IFT140-204ENST00000439987 ADRA1BP35368 520 aa15.47■□□□□ 0.07
IFT140-204ENST00000439987 LIG3P49916 1009 aa15.47■□□□□ 0.07
IFT140-204ENST00000439987 CTXN3Q4LDR2 81 aa15.47■□□□□ 0.07
IFT140-204ENST00000439987 EFHC2Q5JST6 749 aa15.47■□□□□ 0.07
IFT140-204ENST00000439987 PCGF5Q86SE9 256 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms