RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 DAPK3O43293 454 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 XPOTO43592 962 aaKnown RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 PROSCO94903 275 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 KRT14P02533 472 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 C4BPAP04003 597 aaKnown RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 RHOP08100 348 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ODC1P11926 461 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 KCNE1P15382 129 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 COMTP21964 271 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 CDH5P33151 784 aaPredicted RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 CCR2P41597 374 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 DHX9Q08211 1270 aaKnown RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 CALCOCO2Q13137 446 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 SIX1Q15475 284 aaPredicted RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 SMAD2Q15796 467 aaKnown RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 CCNG2Q16589 344 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ARHGAP44Q17R89 818 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF699Q32M78 642 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 LEXMQ3ZCV2 418 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 TDRD10Q5VZ19 366 aaKnown RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 NAA35Q5VZE5 725 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 CCDC137Q6PK04 289 aaKnown RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 PARM1Q6UWI2 310 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 C6orf89Q6UWU4 347 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ZDHHC24Q6UX98 284 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 METTL23Q86XA0 190 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ADGRF2Q8IZF7 708 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 MCOLN2Q8IZK6 566 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 NIPA2Q8N8Q9 360 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 MAB21L3Q8N8X9 362 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 EXD1Q8NHP7 514 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF461Q8TAF7 563 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 MYCBPAPQ8TBZ2 947 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 TAS1R2Q8TE23 839 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF473Q8WTR7 871 aaKnown RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF653Q96CK0 615 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ZSWIM3Q96MP5 696 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 NUP85Q9BW27 656 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 LMAN2LQ9H0V9 348 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 ZDHHC4Q9NPG8 344 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 SMARCAL1Q9NZC9 954 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 LMCD1Q9NZU5 365 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 DNMT3BQ9UBC3 853 aaKnown RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 CHORDC1Q9UHD1 332 aaPredicted RBP4.97□□□□□ -1.61
EDEM3-203ENST00000439962 RSPH14Q9UHP6 348 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 FAM169AQ9Y6X4 670 aa4.97□□□□□ -1.61
EDEM3-203ENST00000439962 CALB1P05937 261 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 CCDC130P13994 396 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 WEE1P30291 646 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ALDH1A3P47895 512 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF132P52740 706 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 IFFO1Q0D2I5 559 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 MYO1EQ12965 1108 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SMAD4Q13485 552 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 NCOA4Q13772 614 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ACAP1Q15027 740 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SOWAHAQ2M3V2 549 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 TTC31Q49AM3 519 aaPredicted RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ZC3H12AQ5D1E8 599 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ERMARDQ5T6L9 678 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 PLEKHA7Q6IQ23 1121 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 RHBDF2Q6PJF5 856 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 HFE2Q6ZVN8 426 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 PDZD4Q76G19 769 aaPredicted RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SV2AQ7L0J3 742 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 MON1BQ7L1V2 547 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 OSTM1Q86WC4 334 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 WDR49Q8IV35 697 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 RHOT1Q8IXI2 618 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 UBR7Q8N806 425 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 CCDC89Q8N998 374 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 TDRD5Q8NAT2 981 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 UBLCP1Q8WVY7 318 aaPredicted RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ALG3Q92685 438 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 FGF13Q92913 245 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 MAGOHBQ96A72 148 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 PBXIP1Q96AQ6 731 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SNF8Q96H20 258 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 RBM41Q96IZ5 413 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF512Q96ME7 567 aaPredicted RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 TTC25Q96NG3 672 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 CCT8L2Q96SF2 557 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 KCNK16Q96T55 309 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 PCDHB18PQ96TA0 734 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 PHF7Q9BWX1 381 aaPredicted RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 AP1M1Q9BXS5 423 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 S1PR5Q9H228 398 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SNX25Q9H3E2 840 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 KDM4CQ9H3R0 1056 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 KCNK12Q9HB15 430 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ACP6Q9NPH0 428 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 FAM86C1Q9NVL1 165 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 DDX56Q9NY93 547 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 IP6K2Q9UHH9 426 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 LGALS13Q9UHV8 139 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 PCDHGC3Q9UN70 934 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 LZTS1Q9Y250 596 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 DRG1Q9Y295 367 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 GOLGA6L7A0A1B0GV03 622 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SPOPO43791 374 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms