RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 DGCR14Q96DF8 476 aaKnown RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 DCUN1D1Q96GG9 259 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 C7orf26Q96N11 449 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 UNKQ9C0B0 810 aaKnown RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 SUDS3Q9H7L9 328 aaPredicted RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 C20orf96Q9NUD7 363 aaPredicted RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 FAM49BQ9NUQ9 324 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 ANKRD33BA6NCL7 494 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 CASQ2O14958 399 aaPredicted RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 ASNSP08243 561 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 CAP2P40123 477 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 ETV4P43268 484 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 RPL5P46777 297 aaKnown RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 PPIDQ08752 370 aaKnown RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 PDK1Q15118 436 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 TBC1D25Q3MII6 688 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 PPM1JQ5JR12 505 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 PAOXQ6QHF9 649 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 UNC5AQ6ZN44 842 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 TSHZ1Q6ZSZ6 1077 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 TRIM67Q6ZTA4 783 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 C10orf107Q8IVU9 208 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 JADE3Q92613 823 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 CPXM1Q96SM3 734 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 FERMT1Q9BQL6 677 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 DCUN1D5Q9BTE7 237 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 DNAAF2Q9NVR5 837 aaKnown RBP9.35□□□□□ -0.91
COPB1-202ENST00000439561 TELO2Q9Y4R8 837 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 AP4B1Q9Y6B7 739 aa9.35□□□□□ -0.91
COPB1-202ENST00000439561 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.34□□□□□ -0.91
COPB1-202ENST00000439561 SMIM31A0A1B0GVY4 71 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 ENTPD3O75355 529 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 CSPG5O95196 566 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 SOX11P35716 441 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 FDFT1P37268 417 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 GARSP41250 739 aaKnown RBP9.34□□□□□ -0.91
COPB1-202ENST00000439561 GRIA1P42261 906 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 IGBP1P78318 339 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 ZC3H12AQ5D1E8 599 aaKnown RBP9.34□□□□□ -0.91
COPB1-202ENST00000439561 SNRNP48Q6IEG0 339 aaKnown RBP9.34□□□□□ -0.91
COPB1-202ENST00000439561 LAYNQ6UX15 382 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 MPP5Q8N3R9 675 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 LRRC71Q8N4P6 559 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 DCLK2Q8N568 766 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 RNF149Q8NC42 400 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 WDR83Q9BRX9 315 aaKnown RBP9.34□□□□□ -0.91
COPB1-202ENST00000439561 C20orf27Q9GZN8 174 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 GPAMQ9HCL2 828 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 XPNPEP1Q9NQW7 623 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 ZNF302Q9NR11 478 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 BCAP29Q9UHQ4 241 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 UBIAD1Q9Y5Z9 338 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 A0A088AWK7 358 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 SDC4P31431 198 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 GTF2A2P52657 109 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 NADK2Q4G0N4 442 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 KCTD21Q4G0X4 260 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 DACT2Q5SW24 774 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 ANGEL2Q5VTE6 544 aaKnown RBP9.34□□□□□ -0.91
COPB1-202ENST00000439561 CMC1Q7Z7K0 106 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 AMIGO2Q86SJ2 522 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 TRIM50Q86XT4 487 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 ZBTB8OSQ8IWT0 167 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 PHTF2Q8N3S3 785 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 SAMD3Q8N6K7 520 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 CNKSR2Q8WXI2 1034 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 ITFG2Q969R8 447 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 FAM149B1Q96BN6 582 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 ST6GALNAC4Q9H4F1 302 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 LIN28AQ9H9Z2 209 aaKnown RBP9.34□□□□□ -0.91
COPB1-202ENST00000439561 C17orf75Q9HAS0 396 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 PICK1Q9NRD5 415 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 THEGQ9P2T0 379 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 EPS15L1Q9UBC2 864 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 SSX2IPQ9Y2D8 614 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 TDRKHQ9Y2W6 561 aaKnown RBP9.34□□□□□ -0.91
COPB1-202ENST00000439561 SMCHD1A6NHR9 2005 aa9.34□□□□□ -0.91
COPB1-202ENST00000439561 GOLGB1Q14789 3259 aaKnown RBP9.34□□□□□ -0.91
COPB1-202ENST00000439561 SPDYE16A6NNV3 312 aaPredicted RBP9.33□□□□□ -0.92
COPB1-202ENST00000439561 PMM2O15305 246 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 LSM8O95777 96 aaKnown RBP9.33□□□□□ -0.92
COPB1-202ENST00000439561 GPD1P21695 349 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 CHRNA5P30532 468 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 MLH1P40692 756 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 GLRBP48167 497 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 SLC18A2Q05940 514 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 WASHC5Q12768 1159 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 XKR3Q5GH77 459 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 TMCO4Q5TGY1 634 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 IL31Q6EBC2 164 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 KLC3Q6P597 504 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 AAGABQ6PD74 315 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 FRMD7Q6ZUT3 714 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 FAM156AQ8NDB6 213 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 CERKQ8TCT0 537 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 NUF2Q9BZD4 464 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 WDR55Q9H6Y2 383 aaPredicted RBP9.33□□□□□ -0.92
COPB1-202ENST00000439561 NRDE2Q9H7Z3 1164 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 ARHGEF4Q9NR80 690 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms