RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 SCINQ9Y6U3 715 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 CDH23Q9H251 3354 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 hCG_1818297A0A087WSY0 165 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 PGM3O95394 542 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 DESP17661 470 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 ICAM3P32942 547 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 CPOXP36551 454 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 AQP5P55064 265 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 PEX3P56589 373 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 HPCAP84074 193 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 ANKRD20A4Q4UJ75 823 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 IQSEC1Q6DN90 963 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 UGT2A3Q6UWM9 527 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 B3GNT9Q6UX72 402 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 TRIM42Q8IWZ5 723 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 PAWRQ96IZ0 340 aaKnown RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 DNAJC1Q96KC8 554 aaKnown RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 SENP7Q9BQF6 1050 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 MECRQ9BV79 373 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 IQCGQ9H095 443 aaKnown RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 C1orf112Q9NSG2 853 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 PCDH10Q9P2E7 1040 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 SOX13Q9UN79 622 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 PTPRSQ13332 1948 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 SCN5AQ14524 2016 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 TXNDC9O14530 226 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 COPEO14579 308 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 VILLO15195 856 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 INHBAP08476 426 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 KITP10721 976 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 PEX2P28328 305 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 GTF2H1P32780 548 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 RPL26P61254 145 aaKnown RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 NOMO3P69849 1222 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 TMPRSS15P98073 1019 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 TNFAIP2Q03169 654 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 SNX17Q15036 470 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 ATG16L1Q676U5 607 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 TLK2Q86UE8 772 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 SLC35B2Q8TB61 432 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 SLC26A7Q8TE54 656 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 SLC44A1Q8WWI5 657 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 EMID1Q96A84 441 aaPredicted RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 ACSF2Q96CM8 615 aaPredicted RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 VCPIP1Q96JH7 1222 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 FAM84AQ96KN4 292 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 SRPK1Q96SB4 655 aaKnown RBP8.87□□□□□ -0.99
HPS4-206ENST00000439453 ST6GALNAC4Q9H4F1 302 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 SMYD3Q9H7B4 428 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 C10orf88Q9H8K7 445 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 ZNF510Q9Y2H8 683 aa8.87□□□□□ -0.99
HPS4-206ENST00000439453 TCRBV7S3A2A0A539 114 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 FARP2O94887 1054 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 C6orf222P0C671 652 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 SMIM18P0DKX4 95 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 HOXD8P13378 290 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 TSHRP16473 764 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 ZNF200P98182 395 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 NCOA4Q13772 614 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 UBAP2LQ14157 1087 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 STXBP2Q15833 593 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 B3GNT6Q6ZMB0 384 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 RBM44Q6ZP01 1051 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 CDHR3Q6ZTQ4 885 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 PDIK1LQ8N165 341 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 E2F7Q96AV8 911 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 MFSD14AQ96MC6 490 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 PRICKLE1Q96MT3 831 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 RILPQ96NA2 401 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 ZNF395Q9H8N7 513 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 MARCOQ9UEW3 520 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 Q9Y3F1 56 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 SPATA31C2B4DYI2 1134 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 AP1G1O43747 822 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 SERPINA6P08185 405 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 GDF10P55107 478 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 RPL7AP62424 266 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 SLC25A3Q00325 362 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 BEX3Q00994 111 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CYP24A1Q07973 514 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CCNIQ14094 377 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 TFDP3Q5H9I0 405 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CES4AQ5XG92 561 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 TRIM72Q6ZMU5 477 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 MIER3Q7Z3K6 550 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 PHF13Q86YI8 300 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 IGDCC3Q8IVU1 814 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 PARVAQ9NVD7 372 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 EXOC7Q9UPT5 735 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 C15orf38-AP3S2A0A0A6YYH1 394 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CCDC195A0A1B0GUA6 201 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CCDC160A6NGH7 325 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 TMEM63AO94886 807 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 UBA1P22314 1058 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 CCND2P30279 289 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 PTPN7P35236 360 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 RPL22P35268 128 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 RARRES1P49788 294 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CDK18Q07002 472 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms