RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 RAD23BP54727 409 aa19.09■□□□□ 0.65
GTF3A-204ENST00000438571 GOLGA8FQ08AF8 430 aa19.09■□□□□ 0.65
GTF3A-204ENST00000438571 GOLGA8DPQ0D2H9 430 aa19.09■□□□□ 0.65
GTF3A-204ENST00000438571 EFEMP1Q12805 493 aa19.09■□□□□ 0.65
GTF3A-204ENST00000438571 GEN1Q17RS7 908 aa19.09■□□□□ 0.65
GTF3A-204ENST00000438571 KRT39Q6A163 491 aa19.09■□□□□ 0.65
GTF3A-204ENST00000438571 OR2I1PQ8NGU4 316 aa19.09■□□□□ 0.65
GTF3A-204ENST00000438571 NDRG1Q92597 394 aaKnown RBP19.09■□□□□ 0.65
GTF3A-204ENST00000438571 CISHQ9NSE2 258 aa19.09■□□□□ 0.65
GTF3A-204ENST00000438571 WDR35Q9P2L0 1181 aa19.09■□□□□ 0.65
GTF3A-204ENST00000438571 SPEGQ15772 3267 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 A0A1W2PQ27 194 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 A0A1W2PQ64 194 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 A0A1W2PQD8 194 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 C1QTNF9BB2RNN3 333 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 CFIP05156 583 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 C1QTNF9P0C862 333 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 PNOCQ13519 176 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 PREPLQ4J6C6 727 aaPredicted RBP19.08■□□□□ 0.64
GTF3A-204ENST00000438571 CBWD6Q4V339 395 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 CBWD3Q5JTY5 395 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 CBWD5Q5RIA9 395 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 FYB2Q5VWT5 728 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 SLC23A3Q6PIS1 610 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 BHLHA9Q7RTU4 235 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 PIGZQ86VD9 579 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 HEXIM2Q96MH2 286 aaKnown RBP19.08■□□□□ 0.64
GTF3A-204ENST00000438571 NUSAP1Q9BXS6 441 aaKnown RBP19.08■□□□□ 0.64
GTF3A-204ENST00000438571 FBXO10Q9UK96 956 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 CLEC4EQ9ULY5 219 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 CEP295Q9C0D2 2601 aa19.08■□□□□ 0.64
GTF3A-204ENST00000438571 AP5Z1O43299 807 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 TRIM21P19474 475 aaKnown RBP19.07■□□□□ 0.64
GTF3A-204ENST00000438571 CSRP1P21291 193 aaKnown RBP19.07■□□□□ 0.64
GTF3A-204ENST00000438571 RPL13P26373 211 aaKnown RBP19.07■□□□□ 0.64
GTF3A-204ENST00000438571 CORO1AP31146 461 aaKnown RBP19.07■□□□□ 0.64
GTF3A-204ENST00000438571 MFAP3P55082 362 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 MCCD1P59942 119 aaPredicted RBP19.07■□□□□ 0.64
GTF3A-204ENST00000438571 ZNF33AQ06730 810 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 ENPEPQ07075 957 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 EDRF1Q3B7T1 1238 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 ERCC4Q92889 916 aaPredicted RBP19.07■□□□□ 0.64
GTF3A-204ENST00000438571 TMEM176AQ96HP8 235 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 HSPA12BQ96MM6 686 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 RAB20Q9NX57 234 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 CLIC5Q9NZA1 410 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 AKAP13Q12802 2813 aa19.07■□□□□ 0.64
GTF3A-204ENST00000438571 PTPRBP23467 1997 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 PLXNB3Q9ULL4 1909 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 PENKP01210 267 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-204ENST00000438571 RALAP11233 206 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 IL12RB1P42701 662 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 PMS1P54277 932 aaKnown RBP19.06■□□□□ 0.64
GTF3A-204ENST00000438571 LMAN2Q12907 356 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 BYSLQ13895 437 aaKnown RBP19.06■□□□□ 0.64
GTF3A-204ENST00000438571 RAB41Q5JT25 222 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 SPDYCQ5MJ68 293 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 KIAA1324Q6UXG2 1013 aaKnown RBP19.06■□□□□ 0.64
GTF3A-204ENST00000438571 NUDT18Q6ZVK8 323 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 CCDC150Q8NCX0 1101 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 FBXL13Q8NEE6 735 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 MRGPRX1Q96LB2 322 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 GTPBP2Q9BX10 602 aaKnown RBP19.06■□□□□ 0.64
GTF3A-204ENST00000438571 TMEM121BQ9BXQ6 578 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-204ENST00000438571 CAPN10Q9HC96 672 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 AGO1Q9UL18 857 aaKnown RBP19.06■□□□□ 0.64
GTF3A-204ENST00000438571 STON1Q9Y6Q2 735 aa19.06■□□□□ 0.64
GTF3A-204ENST00000438571 PLXNA2O75051 1894 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 IGF2RP11717 2491 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 TRIM49BA6NDI0 452 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 CEACAM1P13688 526 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 GTF2H1P32780 548 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 PRCPP42785 496 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 PSEN1P49768 467 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 YWHAGP61981 247 aaKnown RBP eCLIP19.05■□□□□ 0.64
GTF3A-204ENST00000438571 GOLGA7BQ2TAP0 167 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 FUT11Q495W5 492 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 DCAF17Q5H9S7 520 aaPredicted RBP19.05■□□□□ 0.64
GTF3A-204ENST00000438571 ARHGAP17Q68EM7 881 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 SLC36A4Q6YBV0 504 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 DENND1CQ8IV53 801 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 ZNF276Q8N554 614 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 TRIML1Q8N9V2 468 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 ULBP1Q9BZM6 244 aa19.05■□□□□ 0.64
GTF3A-204ENST00000438571 SCAND2PQ9GZW5 306 aaPredicted RBP19.05■□□□□ 0.64
GTF3A-204ENST00000438571 RALYQ9UKM9 306 aaKnown RBP19.05■□□□□ 0.64
GTF3A-204ENST00000438571 SPAARA0A1B0GVQ0 90 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 SLC12A8A0AV02 714 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 EPB41P11171 864 aaKnown RBP19.04■□□□□ 0.64
GTF3A-204ENST00000438571 TKTL1P51854 596 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 PDE4CQ08493 712 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 DUOXA1Q1HG43 343 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 TCERG1LQ5VWI1 586 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 SDE2Q6IQ49 451 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 UNQ6494/PRO21346Q6UXR6 183 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 CACUL1Q86Y37 369 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 SORCS1Q8WY21 1168 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 MKRN2Q9H000 416 aaKnown RBP19.04■□□□□ 0.64
GTF3A-204ENST00000438571 MARCH2Q9P0N8 246 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 TSPAN16Q9UKR8 245 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms