RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 ORC1Q13415 861 aa17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 DHX8Q14562 1220 aaKnown RBP17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 GEN1Q17RS7 908 aa17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 HS2ST1Q7LGA3 356 aa17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 KCTD17Q8N5Z5 321 aa17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 ZNF248Q8NDW4 579 aa17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 CACTINQ8WUQ7 758 aaKnown RBP17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 SAAL1Q96ER3 474 aa17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 MED8Q96G25 268 aa17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 TRIM4Q9C037 500 aa17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 IL17BQ9UHF5 180 aa17.29■□□□□ 0.36
HMGN1P19-201ENST00000436976 LAD1O00515 517 aa17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 ZDHHC11BP0C7U3 371 aa17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 ACADMP11310 421 aa17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 PRICKLE2Q7Z3G6 844 aa17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 FBXO18Q8NFZ0 1043 aa17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 HIC2Q96JB3 615 aa17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 MRPL45Q9BRJ2 306 aaKnown RBP17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 KLF16Q9BXK1 252 aaPredicted RBP17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 DPEP3Q9H4B8 488 aa17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 ZHX3Q9H4I2 956 aa17.28■□□□□ 0.36
HMGN1P19-201ENST00000436976 SYNCRIPO60506 623 aaKnown RBP17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 TSPAN3O60637 253 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 RTN3O95197 1032 aaPredicted RBP17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 MFAP3P55082 362 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 KCNA1Q09470 495 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 ZNF234Q14588 700 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 CENPQQ7L2Z9 268 aaPredicted RBP17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 SAP25Q8TEE9 199 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 SNRNP27Q8WVK2 155 aaKnown RBP17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 HPDLQ96IR7 371 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 KCNK16Q96T55 309 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 B3GNT5Q9BYG0 378 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 ELOVL4Q9GZR5 314 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 ST6GALNAC4Q9H4F1 302 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 PDE11AQ9HCR9 933 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 BLOC1S4Q9NUP1 217 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 RBAKQ9NYW8 714 aaPredicted RBP17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 IL37Q9NZH6 218 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 SLC27A6Q9Y2P4 619 aa17.27■□□□□ 0.36
HMGN1P19-201ENST00000436976 DFNA5O60443 496 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 PPP1R37O75864 691 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 TBX18O95935 607 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 GLDCP23378 1020 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 CD27P26842 260 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 UCNP55089 124 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 PCBP4P57723 403 aaKnown RBP17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 GNL2Q13823 731 aaKnown RBP17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 POSTNQ15063 836 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 CACTIN-AS1Q8N1I8 211 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 EID2Q8N6I1 236 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 DCBLD1Q8N8Z6 715 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 RBBP8NLQ8NC74 664 aaPredicted RBP17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 OR5B17Q8NGF7 314 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 RFFLQ8WZ73 363 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 CDK5RAP3Q96JB5 506 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 ELF4Q99607 663 aaPredicted RBP17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 NXF1Q9UBU9 619 aaKnown RBP17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 CLCA2Q9UQC9 943 aa17.26■□□□□ 0.35
HMGN1P19-201ENST00000436976 COL27A1Q8IZC6 1860 aaPredicted RBP17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 NYNRINQ9P2P1 1898 aaKnown RBP17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 FAM92AA1XBS5 289 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 GOLGA8IPA6NC78 632 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 GOLGA8JA6NMD2 632 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 NPC1O15118 1278 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 TLR5O60602 858 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 FSBPO95073 299 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 SEMA4FO95754 770 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 NTRK1P04629 796 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 PTPN1P18031 435 aaKnown RBP17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 ABCD1P33897 745 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 SLC5A3P53794 718 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 CDH8P55286 799 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 INSM1Q01101 510 aaPredicted RBP17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 BROXQ5VW32 411 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 ADAT2Q7Z6V5 191 aaKnown RBP17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 NACA2Q9H009 215 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 PCDHB1Q9Y5F3 818 aa17.25■□□□□ 0.35
HMGN1P19-201ENST00000436976 NOTCH2Q04721 2471 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 WNT1P04628 370 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 IGHV4-34P06331 123 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 ITGAVP06756 1048 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 TMEM191BP0C7N4 346 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 C7P10643 843 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 GNL1P36915 607 aaPredicted RBP17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 MCM6Q14566 821 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 KIAA1614Q5VZ46 1190 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 Q6ZNB5 142 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 ZNF720Q7Z2F6 126 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 DHX40Q8IX18 779 aaKnown RBP17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 SORCS1Q8WY21 1168 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 SLC6A18Q96N87 628 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 MMS19Q96T76 1030 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 STRA6Q9BX79 667 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 LHX5Q9H2C1 402 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 IGSF5Q9NSI5 407 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 INTS13Q9NVM9 706 aa17.24■□□□□ 0.35
HMGN1P19-201ENST00000436976 VWA3AA6NCI4 1184 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms