RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 RARAP10276 462 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 TUBP50607 506 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 SMTNL2Q2TAL5 461 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 KCNT1Q5JUK3 1230 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 ZFYVE27Q5T4F4 411 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 FAM131BQ86XD5 332 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 TMC8Q8IU68 726 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 RNF14Q9UBS8 474 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 SFMBT1Q9UHJ3 866 aa23.95■■□□□ 1.42
CPSF4-204ENST00000436336 MDM4O15151 490 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 ZRANB2O95218 330 aaKnown RBP eCLIP23.94■■□□□ 1.42
CPSF4-204ENST00000436336 POU2F2P09086 479 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 PYGMP11217 842 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 CXCR3P49682 368 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 AIF1P55008 147 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 WHAMMP3Q1A5X7 153 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 HECTD3Q5T447 861 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 ERMARDQ5T6L9 678 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 SEL1L2Q5TEA6 688 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 TMEM150AQ86TG1 271 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 CREG2Q8IUH2 290 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 RBM41Q96IZ5 413 aaKnown RBP23.94■■□□□ 1.42
CPSF4-204ENST00000436336 NSUN3Q9H649 340 aaKnown RBP23.94■■□□□ 1.42
CPSF4-204ENST00000436336 CCSER2Q9H7U1 834 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 ASAH2Q9NR71 780 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 DOCK6Q96HP0 2047 aa23.94■■□□□ 1.42
CPSF4-204ENST00000436336 CEP104O60308 925 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 XYLBO75191 536 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 KRT1P04264 644 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 ZNF211Q13398 564 aaPredicted RBP23.93■■□□□ 1.42
CPSF4-204ENST00000436336 NNTQ13423 1086 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 KCNC3Q14003 757 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 ODF2Q5BJF6 829 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 C10orf120Q5SQS8 335 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 KLHDC10Q6PID8 442 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 RCOR2Q8IZ40 523 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 RASGEF1CQ8N431 466 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 CMASQ8NFW8 434 aaPredicted RBP23.93■■□□□ 1.42
CPSF4-204ENST00000436336 NTAN1Q96AB6 310 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 CAPZA3Q96KX2 299 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 SNRNP25Q9BV90 132 aaKnown RBP23.93■■□□□ 1.42
CPSF4-204ENST00000436336 SPDYE4A6NLX3 237 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 PTPN2P17706 415 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 GABRR2P28476 465 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 ATP5C1P36542 298 aaKnown RBP23.93■■□□□ 1.42
CPSF4-204ENST00000436336 EFEMP1Q12805 493 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 PSTKQ8IV42 348 aaKnown RBP23.93■■□□□ 1.42
CPSF4-204ENST00000436336 HS6ST3Q8IZP7 471 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 CCDC185Q8N715 623 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 HSPH1Q92598 858 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 CORO1BQ9BR76 489 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 WDCPQ9H6R7 721 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 KLHL11Q9NVR0 708 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 LMCD1Q9NZU5 365 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 TLR6Q9Y2C9 796 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 NOTCH4Q99466 2003 aa23.93■■□□□ 1.42
CPSF4-204ENST00000436336 FGF19O95750 216 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 CDC25CP30307 473 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 EPHA5P54756 1037 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 ARL13BQ3SXY8 428 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 BRMS1LQ5PSV4 323 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 CCDC181Q5TID7 509 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 ACTRT1Q8TDG2 376 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 ACSF2Q96CM8 615 aaPredicted RBP23.92■■□□□ 1.42
CPSF4-204ENST00000436336 PRKD2Q9BZL6 878 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 MARCH2Q9P0N8 246 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 RASAL2Q9UJF2 1139 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 TTC7AQ9ULT0 858 aaPredicted RBP23.92■■□□□ 1.42
CPSF4-204ENST00000436336 FZD10Q9ULW2 581 aa23.92■■□□□ 1.42
CPSF4-204ENST00000436336 MSI1O43347 362 aaKnown RBP23.91■■□□□ 1.42
CPSF4-204ENST00000436336 TBX18O95935 607 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 CETN2P41208 172 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 COPS2P61201 443 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 PPP2R5DQ14738 602 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 CCDC50Q8IVM0 306 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 LEMD2Q8NC56 503 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 KCTD6Q8NC69 237 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 RAPGEF5Q92565 580 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 RNF34Q969K3 372 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 MS4A14Q96JA4 679 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 GCNAQ96QF7 691 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.91■■□□□ 1.42
CPSF4-204ENST00000436336 DNMT3LQ9UJW3 386 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 AP4E1Q9UPM8 1137 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 C2orf16Q68DN1 1984 aa23.91■■□□□ 1.42
CPSF4-204ENST00000436336 LRRD1A4D1F6 860 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 PAPLNO95428 1278 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 OAS1P00973 400 aaKnown RBP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 KDELR1P24390 212 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 CCR1P32246 355 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 ADRA1BP35368 520 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 PAFAH1B1P43034 410 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 KPNA1P52294 538 aaPredicted RBP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 CKAP4Q07065 602 aaKnown RBP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 SCAPQ12770 1279 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 CLUL1Q15846 466 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 AADACL2Q6P093 401 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 GAREM2Q75VX8 874 aa23.9■■□□□ 1.42
CPSF4-204ENST00000436336 MRPS31Q92665 395 aaKnown RBP23.9■■□□□ 1.42
CPSF4-204ENST00000436336 RNF25Q96BH1 459 aaPredicted RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms