RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 IP6K2Q9UHH9 426 aa17.24■□□□□ 0.35
CTDSPL-204ENST00000435525 TLR6Q9Y2C9 796 aa17.24■□□□□ 0.35
CTDSPL-204ENST00000435525 C2CD4BA6NLJ0 364 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 M0QYT0 321 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 LEFTY2O00292 366 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 RNF8O76064 485 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 FYNP06241 537 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 CCDC175P0C221 793 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 PSMA2P25787 234 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 CCR1P32246 355 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 RFC1P35251 1148 aaPredicted RBP17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 FLT3P36888 993 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 VAV2P52735 878 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 ZNF143P52747 638 aaPredicted RBP17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 DEUP1Q05D60 604 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 RING1Q06587 406 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 KIF5AQ12840 1032 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 NME3Q13232 169 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 MTF1Q14872 753 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 ACAP1Q15027 740 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 IFI16Q16666 785 aaKnown RBP17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 ZNF564Q8TBZ8 553 aaPredicted RBP17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 BPIFB1Q8TDL5 484 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 SLC22A12Q96S37 553 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 NPY6RQ99463 290 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 DDX50Q9BQ39 737 aaKnown RBP17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 KLF16Q9BXK1 252 aaPredicted RBP17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 TSGA10Q9BZW7 698 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 CFAP97Q9P2B7 532 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 SFMBT1Q9UHJ3 866 aa17.23■□□□□ 0.35
CTDSPL-204ENST00000435525 MYH10P35580 1976 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 PATJQ8NI35 1801 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 SYNJ2BP-COX16A0A087WUM0 186 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 TCRBV5S1A1TA0A578 114 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 E2F8A0AVK6 867 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 TMEM191CA6NGB0 347 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 HEPACAM2A8MVW5 462 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 LOC730098B7Z3J9 87 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 ANHXE9PGG2 379 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 MDM4O15151 490 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 HMBSP08397 361 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 IRF1P10914 325 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 RDXP35241 583 aaKnown RBP17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 NOP2P46087 812 aaKnown RBP17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 SLC11A2P49281 568 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 NAP1L1P55209 391 aaKnown RBP17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 PIGHQ14442 188 aaPredicted RBP17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 ARL13BQ3SXY8 428 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 TJAP1Q5JTD0 557 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 PPP1R15BQ5SWA1 713 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 ACBD5Q5T8D3 534 aaPredicted RBP17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 STRADAQ7RTN6 431 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 TAC4Q86UU9 113 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 DNAAF5Q86Y56 855 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 EMC1Q8N766 993 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 ATP6V0D2Q8N8Y2 350 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 JOSD2Q8TAC2 188 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 KHSRPQ92945 711 aaKnown RBP eCLIP17.22■□□□□ 0.354e-11■■■■□ 20.6
CTDSPL-204ENST00000435525 PGAP3Q96FM1 320 aaPredicted RBP17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 PACSIN1Q9BY11 444 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 SMG9Q9H0W8 520 aaKnown RBP17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 COX16Q9P0S2 106 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 LIMD1Q9UGP4 676 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 ANAPC7Q9UJX3 599 aa17.22■□□□□ 0.35
CTDSPL-204ENST00000435525 A0A0A6YYK5 440 aaPredicted RBP17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 NRG2O14511 850 aaPredicted RBP17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 ZNF263O14978 683 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 IRAK2O43187 625 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 PRAMEF12O95522 483 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 LATS1O95835 1130 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 PSMC3P17980 439 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 VIPR2P41587 438 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 IFNAR2P48551 515 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 RPL7AP62424 266 aaKnown RBP17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 ATP11AP98196 1134 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 ZP2Q05996 745 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 USP4Q13107 963 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 HTR4Q13639 388 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 ARHGAP29Q52LW3 1261 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 BRMS1LQ5PSV4 323 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 TANGO2Q6ICL3 276 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 PARM1Q6UWI2 310 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 MFSD6LQ8IWD5 586 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 ACRBPQ8NEB7 543 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 ADAM32Q8TC27 787 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 NT5C3BQ969T7 300 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 OTUB2Q96DC9 234 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 CFAP57Q96MR6 1250 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 TBCBQ99426 244 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 KXD1Q9BQD3 176 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 TRMT61BQ9BVS5 477 aaKnown RBP17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 WDCPQ9H6R7 721 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 GKN1Q9NS71 199 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 NUMBLQ9Y6R0 609 aa17.21■□□□□ 0.35
CTDSPL-204ENST00000435525 MSI1O43347 362 aaKnown RBP17.2■□□□□ 0.34
CTDSPL-204ENST00000435525 KRT86O43790 486 aa17.2■□□□□ 0.34
CTDSPL-204ENST00000435525 STC2O76061 302 aa17.2■□□□□ 0.34
CTDSPL-204ENST00000435525 GJB6O95452 261 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms