RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 TRIM62Q9BVG3 475 aa26.23■■□□□ 1.79
CPNE1-212ENST00000430570 TRPV5Q9NQA5 729 aa26.23■■□□□ 1.79
CPNE1-212ENST00000430570 HEBP1Q9NRV9 189 aa26.23■■□□□ 1.79
CPNE1-212ENST00000430570 TMEM59LQ9UK28 342 aa26.23■■□□□ 1.79
CPNE1-212ENST00000430570 FBXL21Q9UKT6 434 aa26.23■■□□□ 1.79
CPNE1-212ENST00000430570 HBS1LQ9Y450 684 aaKnown RBP26.23■■□□□ 1.79
CPNE1-212ENST00000430570 COL4A3Q01955 1670 aa26.23■■□□□ 1.79
CPNE1-212ENST00000430570 BDP1A6H8Y1 2624 aa26.23■■□□□ 1.79
CPNE1-212ENST00000430570 COL4A2P08572 1712 aa26.22■■□□□ 1.79
CPNE1-212ENST00000430570 KRBA1A5PL33 1030 aa26.22■■□□□ 1.79
CPNE1-212ENST00000430570 GZMAP12544 262 aa26.22■■□□□ 1.79
CPNE1-212ENST00000430570 EIF4A3P38919 411 aaKnown RBP26.22■■□□□ 1.79
CPNE1-212ENST00000430570 C1QBPQ07021 282 aaKnown RBP26.22■■□□□ 1.79
CPNE1-212ENST00000430570 PDGFRLQ15198 375 aa26.22■■□□□ 1.79
CPNE1-212ENST00000430570 TRIP4Q15650 581 aaPredicted RBP26.22■■□□□ 1.79
CPNE1-212ENST00000430570 TRNP1Q6NT89 227 aa26.22■■□□□ 1.79
CPNE1-212ENST00000430570 CNGA4Q8IV77 575 aa26.22■■□□□ 1.79
CPNE1-212ENST00000430570 METTL5Q9NRN9 209 aaKnown RBP26.22■■□□□ 1.79
CPNE1-212ENST00000430570 TECTAO75443 2155 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 A0A087X0T9 212 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 FTLP02792 175 aaPredicted RBP26.21■■□□□ 1.79
CPNE1-212ENST00000430570 CALB1P05937 261 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 FAM228BP0C875 321 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 FLT3P36888 993 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 GSCP56915 257 aaPredicted RBP26.21■■□□□ 1.79
CPNE1-212ENST00000430570 RUNX3Q13761 415 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 Q6ZNB5 142 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 ADGRG2Q8IZP9 1017 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 KIAA1958Q8N8K9 716 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 CSGALNACT1Q8TDX6 532 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 WDR35Q9P2L0 1181 aa26.21■■□□□ 1.79
CPNE1-212ENST00000430570 TCRBV5S1A1TA0A578 114 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 RTN2O75298 545 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 TRUB2O95900 331 aaKnown RBP26.2■■□□□ 1.79
CPNE1-212ENST00000430570 IGLV3-25P01717 112 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 CORO1AP31146 461 aaKnown RBP26.2■■□□□ 1.79
CPNE1-212ENST00000430570 NOS2P35228 1153 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 SOX9P48436 509 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 TSR1Q2NL82 804 aaKnown RBP26.2■■□□□ 1.79
CPNE1-212ENST00000430570 SIX5Q8N196 739 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 JOSD2Q8TAC2 188 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 PLD4Q96BZ4 506 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 ADAM33Q9BZ11 813 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 ECT2Q9H8V3 914 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 ZNHIT6Q9NWK9 470 aaKnown RBP26.2■■□□□ 1.79
CPNE1-212ENST00000430570 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.2■■□□□ 1.79
CPNE1-212ENST00000430570 TBC1D14Q9P2M4 693 aa26.2■■□□□ 1.79
CPNE1-212ENST00000430570 LSM7Q9UK45 103 aaKnown RBP26.2■■□□□ 1.79
CPNE1-212ENST00000430570 SHISA7A6NL88 538 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 SLC9A3R1O14745 358 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-212ENST00000430570 IGLV3-27P01718 113 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 TFE3P19532 575 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-212ENST00000430570 RRM1P23921 792 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 MATKP42679 507 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 TBX4P57082 545 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 CDK17Q00537 523 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 MAPK8IP2Q13387 824 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-212ENST00000430570 EIF4EBP2Q13542 120 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-212ENST00000430570 MLF2Q15773 248 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-212ENST00000430570 ASTE1Q2TB18 679 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-212ENST00000430570 OTUD1Q5VV17 481 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-212ENST00000430570 VPS36Q86VN1 386 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 DENND1CQ8IV53 801 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 EMC1Q8N766 993 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 SLC39A13Q96H72 371 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 FCRL2Q96LA5 508 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-212ENST00000430570 SERPINB11Q96P15 392 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 DDX23Q9BUQ8 820 aaKnown RBP26.19■■□□□ 1.78
CPNE1-212ENST00000430570 ISCUQ9H1K1 167 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 ARHGEF3Q9NR81 526 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 CALCOCO1Q9P1Z2 691 aa26.19■■□□□ 1.78
CPNE1-212ENST00000430570 IRAK2O43187 625 aa26.18■■□□□ 1.78
CPNE1-212ENST00000430570 PDGFBP01127 241 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-212ENST00000430570 CDC25BP30305 580 aa26.18■■□□□ 1.78
CPNE1-212ENST00000430570 ITPRIPL2Q3MIP1 535 aa26.18■■□□□ 1.78
CPNE1-212ENST00000430570 C3orf20Q8ND61 904 aa26.18■■□□□ 1.78
CPNE1-212ENST00000430570 VCPIP1Q96JH7 1222 aa26.18■■□□□ 1.78
CPNE1-212ENST00000430570 NPY6RQ99463 290 aa26.18■■□□□ 1.78
CPNE1-212ENST00000430570 AGO1Q9UL18 857 aaKnown RBP26.18■■□□□ 1.78
CPNE1-212ENST00000430570 NENFQ9UMX5 172 aa26.18■■□□□ 1.78
CPNE1-212ENST00000430570 TMEM221A6NGB7 291 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 M0R296 226 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 ATMINO43313 823 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-212ENST00000430570 KPNA1P52294 538 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-212ENST00000430570 GFPT1Q06210 699 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-212ENST00000430570 DHCR24Q15392 516 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 PPP1R2P3Q6NXS1 205 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 RHBDF2Q6PJF5 856 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 ARCQ7LC44 396 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 ATP2A3Q93084 1043 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 CHFRQ96EP1 664 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 SELENOOQ9BVL4 669 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 DCLK3Q9C098 648 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 C11orf16Q9NQ32 467 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 TLR6Q9Y2C9 796 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 PIAS3Q9Y6X2 628 aa26.17■■□□□ 1.78
CPNE1-212ENST00000430570 SYNJ2BP-COX16A0A087WUM0 186 aa26.16■■□□□ 1.78
CPNE1-212ENST00000430570 SSU72P8A0A1W2PR75 194 aa26.16■■□□□ 1.78
CPNE1-212ENST00000430570 FAM86C2PA6NEL3 165 aa26.16■■□□□ 1.78
CPNE1-212ENST00000430570 SIGLEC16A6NMB1 481 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms