RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 NOTCH4Q99466 2003 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 PROSCO94903 275 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 ABLIM3O94929 683 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 STAU1O95793 577 aaKnown RBP9.98□□□□□ -0.81
NEDD1-203ENST00000429527 CNPP09543 421 aaKnown RBP9.98□□□□□ -0.81
NEDD1-203ENST00000429527 PIM1P11309 404 aaPredicted RBP9.98□□□□□ -0.81
NEDD1-203ENST00000429527 KCNA5P22460 613 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 MSH2P43246 934 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 LBRQ14739 615 aaKnown RBP9.98□□□□□ -0.81
NEDD1-203ENST00000429527 KRT39Q6A163 491 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 CXorf38Q8TB03 319 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 NKD2Q969F2 451 aaPredicted RBP9.98□□□□□ -0.81
NEDD1-203ENST00000429527 UBE2TQ9NPD8 197 aaPredicted RBP9.98□□□□□ -0.81
NEDD1-203ENST00000429527 CTTNBP2NLQ9P2B4 639 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 KLHL14Q9P2G3 628 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 DENND4CQ5VZ89 1909 aa9.98□□□□□ -0.81
NEDD1-203ENST00000429527 OAZ2O95190 189 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 POMCP01189 267 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 ATP5BP06576 529 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 TRIM49P0CI25 452 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 TRIM49CP0CI26 452 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 CDH5P33151 784 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 ZNF211Q13398 564 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 AADACL2Q6P093 401 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 BZW1Q7L1Q6 419 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 TRMT1LQ7Z2T5 733 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 C10orf82Q8WW14 230 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 RSRC1Q96IZ7 334 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 ZMAT2Q96NC0 199 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 ELAC2Q9BQ52 826 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 POLD4Q9HCU8 107 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 UBQLN1Q9UMX0 589 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 SIGLEC16A6NMB1 481 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 SOBPA7XYQ1 873 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 PIRO00625 290 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 XPOTO43592 962 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 EXOC3O60645 756 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 TGDSO95455 350 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 LDHAP00338 332 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 AKAP5P24588 427 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 CHKAP35790 457 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 CALCOCO2Q13137 446 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 SLC45A4Q5BKX6 768 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 TCERG1LQ5VWI1 586 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 CCDC89Q8N998 374 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 SEMA4DQ92854 862 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 ZBTB9Q96C00 473 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 ZNF707Q96C28 371 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 TTPALQ9BTX7 342 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 GPR62Q9BZJ7 368 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 MMADHCQ9H3L0 296 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 MKS1Q9NXB0 559 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 HES2Q9Y543 173 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 EDF1O60869 148 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 ANP32DO95626 131 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 KRT16P08779 473 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 DHRS4L1P0CG22 281 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 ACO1P21399 889 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 MXI1P50539 228 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 IRX1P78414 480 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 C1QBPQ07021 282 aaKnown RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 EFHC2Q5JST6 749 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 TPGS2Q68CL5 300 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 ANKS3Q6ZW76 656 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 TAS1R1Q7RTX1 841 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 TMC7Q7Z402 723 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 GJD3Q8N144 294 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 IFT43Q96FT9 208 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 SHOC2Q9UQ13 582 aa9.97□□□□□ -0.81
NEDD1-203ENST00000429527 FARP1Q9Y4F1 1045 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-203ENST00000429527 LAMA3Q16787 3333 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 PRRC2BQ5JSZ5 2229 aaKnown RBP9.96□□□□□ -0.81
NEDD1-203ENST00000429527 H7C4K7 107 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 C2CD2LO14523 706 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 KLF11O14901 512 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 ALOX15BO15296 676 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 GAS8O95995 478 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 VIMP08670 466 aaKnown RBP9.96□□□□□ -0.81
NEDD1-203ENST00000429527 ACADSP16219 412 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 EPHA5P54756 1037 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 WDR4P57081 412 aaKnown RBP9.96□□□□□ -0.81
NEDD1-203ENST00000429527 KCNJ2P63252 427 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 SOX4Q06945 474 aaPredicted RBP9.96□□□□□ -0.81
NEDD1-203ENST00000429527 MORF4L2Q15014 288 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 ENOX2Q16206 610 aaKnown RBP9.96□□□□□ -0.81
NEDD1-203ENST00000429527 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.96□□□□□ -0.81
NEDD1-203ENST00000429527 CEP120Q8N960 986 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 SLC7A6OSQ96CW6 309 aaPredicted RBP9.96□□□□□ -0.81
NEDD1-203ENST00000429527 CEP295NLQ96MC4 621 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 HERPUD2Q9BSE4 406 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 CCDC28BQ9BUN5 200 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 DDX23Q9BUQ8 820 aaKnown RBP9.96□□□□□ -0.81
NEDD1-203ENST00000429527 TRIM7Q9C029 511 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 CXCL16Q9H2A7 254 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 USH1CQ9Y6N9 552 aa9.96□□□□□ -0.81
NEDD1-203ENST00000429527 FAM47DPA6NHR8 397 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 PRR33A8MZF0 331 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 TCP11X1B4DZS4 312 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms