RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 ARSEP51690 589 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 EPHB3P54753 998 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 C2orf54Q08AI8 447 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 NME3Q13232 169 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 EIF4EBP2Q13542 120 aaPredicted RBP11.29□□□□□ -0.6
CRIM1-204ENST00000428774 ZC3H12AQ5D1E8 599 aaKnown RBP11.29□□□□□ -0.6
CRIM1-204ENST00000428774 SCYL2Q6P3W7 929 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 MFSD7Q6UXD7 560 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 ZNF572Q7Z3I7 529 aaPredicted RBP11.29□□□□□ -0.6
CRIM1-204ENST00000428774 TMC8Q8IU68 726 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 MICALL1Q8N3F8 863 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 PDZD8Q8NEN9 1154 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 EXD1Q8NHP7 514 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 ACTRT1Q8TDG2 376 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 TEKT4Q8WW24 435 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 OVCA2Q8WZ82 227 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 HSPH1Q92598 858 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 RNF25Q96BH1 459 aaPredicted RBP11.29□□□□□ -0.6
CRIM1-204ENST00000428774 RBM41Q96IZ5 413 aaKnown RBP11.29□□□□□ -0.6
CRIM1-204ENST00000428774 NCAPGQ9BPX3 1015 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 LRRC3Q9BY71 257 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 CCSER2Q9H7U1 834 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 ANLNQ9NQW6 1124 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.29□□□□□ -0.6
CRIM1-204ENST00000428774 MTMR10Q9NXD2 777 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 CLIC5Q9NZA1 410 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 SFMBT1Q9UHJ3 866 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 TTC7AQ9ULT0 858 aaPredicted RBP11.29□□□□□ -0.6
CRIM1-204ENST00000428774 AP4E1Q9UPM8 1137 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 MTCH2Q9Y6C9 303 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 NOTCH4Q99466 2003 aa11.29□□□□□ -0.6
CRIM1-204ENST00000428774 NUP210Q8TEM1 1887 aaPredicted RBP11.29□□□□□ -0.6
CRIM1-204ENST00000428774 PRRC2BQ5JSZ5 2229 aaKnown RBP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 TCRBV7S2A1N4TA0A589 114 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 NRG2O14511 850 aaPredicted RBP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 PER2O15055 1255 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 CCL16O15467 120 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 ZMYND10O75800 440 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 SLU7O95391 586 aaKnown RBP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 FGGP02679 453 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 CD48P09326 243 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 CXCR3P49682 368 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 LLGL1Q15334 1064 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 DUSP6Q16828 381 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 PPM1LQ5SGD2 360 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 ZFYVE27Q5T4F4 411 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 CCDC181Q5TID7 509 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 SPOCD1Q6ZMY3 1216 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 RSRC2Q7L4I2 434 aaKnown RBP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 DNAJB7Q7Z6W7 309 aaPredicted RBP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 TMEM150AQ86TG1 271 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 RBM23Q86U06 439 aaKnown RBP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 ITIH5Q86UX2 942 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 SLC13A5Q86YT5 568 aaPredicted RBP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 CCDC50Q8IVM0 306 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 HS6ST3Q8IZP7 471 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 RNF139Q8WU17 664 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 NTAN1Q96AB6 310 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 MRPL38Q96DV4 380 aaKnown RBP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 SERPINB11Q96P15 392 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 KCTD15Q96SI1 283 aaPredicted RBP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 MAGEB5Q9BZ81 275 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 PCDH18Q9HCL0 1135 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.28□□□□□ -0.6
CRIM1-204ENST00000428774 RASAL2Q9UJF2 1139 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 FZD10Q9ULW2 581 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 HCFC2Q9Y5Z7 792 aa11.28□□□□□ -0.6
CRIM1-204ENST00000428774 DENND4AQ7Z401 1863 aa11.27□□□□□ -0.6
CRIM1-204ENST00000428774 hCG_1818297A0A087WSY0 165 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 ZNF840PA6NDX5 716 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 LINC01565O15544 149 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 TLR5O60602 858 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 RFPL2O75678 378 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 ZRANB2O95218 330 aaKnown RBP eCLIP11.27□□□□□ -0.61
CRIM1-204ENST00000428774 C1RP00736 705 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 F11P03951 625 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 RALAP11233 206 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 KDELR1P24390 212 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 PTPN7P35236 360 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 CDKN2BP42772 138 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 PAFAH1B1P43034 410 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 CDH6P55285 790 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 SCAPQ12770 1279 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 EFEMP1Q12805 493 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 DPYSL3Q14195 570 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 SIX1Q15475 284 aaPredicted RBP11.27□□□□□ -0.61
CRIM1-204ENST00000428774 TAF12Q16514 161 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 PPP2R5EQ16537 467 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 DPYSL2Q16555 572 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 TAZQ16635 292 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 TCEAL5Q5H9L2 206 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 ERMARDQ5T6L9 678 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 SNX30Q5VWJ9 437 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 PYROXD2Q8N2H3 581 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 CEP112Q8N8E3 955 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 MNS1Q8NEH6 495 aa11.27□□□□□ -0.61
CRIM1-204ENST00000428774 CMASQ8NFW8 434 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms