RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 FAM86C2PA6NEL3 165 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 PI4K2BG5E9Z4 385 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 AKR1B10O60218 316 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 RTN2O75298 545 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 GLI1P08151 1106 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 KRT3P12035 628 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 ABCB4P21439 1286 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 CD72P21854 359 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 SOX9P48436 509 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 USP4Q13107 963 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 NR1H3Q13133 447 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 RUNX3Q13761 415 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 ITPRIPL2Q3MIP1 535 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 CCDC122Q5T0U0 273 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 IER5LQ5T953 404 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 DNAJC24Q6P3W2 148 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 TRIM67Q6ZTA4 783 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 SLC26A9Q7LBE3 791 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 TAC4Q86UU9 113 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 EMC1Q8N766 993 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 ATP2A3Q93084 1043 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 BHMTQ93088 406 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 DNAJC7Q99615 494 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 CHP1Q99653 195 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 SLC2A4RGQ9NR83 387 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 WDR35Q9P2L0 1181 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 TBC1D14Q9P2M4 693 aa15.18■□□□□ 0.02
SGCE-204ENST00000428696 A0A087X0T9 212 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 M0QYT0 321 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 TRUB2O95900 331 aaKnown RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 MOCS2O96007 188 aaPredicted RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 FAM228BP0C875 321 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 RRM1P23921 792 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 NOS2P35228 1153 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 MATKP42679 507 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 SULT1E1P49888 294 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 PITX1P78337 314 aaPredicted RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 GFPT1Q06210 699 aaPredicted RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 SIGLEC14Q08ET2 396 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 ANO4Q32M45 955 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 DCUN1D2Q6PH85 259 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 WDR59Q6PJI9 974 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 TPGS1Q6ZTW0 290 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 TPRG1Q6ZUI0 275 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 MCOLN2Q8IZK6 566 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 ADGRG2Q8IZP9 1017 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 CPA6Q8N4T0 437 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 SERPINB11Q96P15 392 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 FAM83CQ9BQN1 747 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 SYT11Q9BT88 431 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 DCLK3Q9C098 648 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 ARHGEF3Q9NR81 526 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 ASNSD1Q9NWL6 643 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 WNT16Q9UBV4 365 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 HBS1LQ9Y450 684 aaKnown RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 PIAS3Q9Y6X2 628 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 MYO16Q9Y6X6 1858 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 NCOR1O75376 2440 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 TMEM221A6NGB7 291 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 GOLGA6L6A8MZA4 724 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 M0R296 226 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 TRDMT1O14717 391 aaKnown RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 ATMINO43313 823 aaPredicted RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 TSPAN3O60637 253 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 DAB1O75553 588 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 NFATC1O95644 943 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 KLKB1P03952 638 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 PDGFRAP16234 1089 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 VCPP55072 806 aaKnown RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 ATP11AP98196 1134 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 PTP4A2Q12974 167 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 TRIP4Q15650 581 aaPredicted RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 MLF2Q15773 248 aaPredicted RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 CDO1Q16878 200 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 ZC3H12AQ5D1E8 599 aaKnown RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 PPP1R2P3Q6NXS1 205 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 MSANTD2Q6P1R3 559 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 ALKBH5Q6P6C2 394 aaKnown RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 HTR3DQ70Z44 454 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 SND1Q7KZF4 910 aaKnown RBP eCLIP15.17■□□□□ 0.028e-7■■■□□ 16.5
SGCE-204ENST00000428696 MON1BQ7L1V2 547 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 JOSD2Q8TAC2 188 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 RXFP2Q8WXD0 754 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 PBXIP1Q96AQ6 731 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 PLD4Q96BZ4 506 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 ZNF653Q96CK0 615 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 SHDQ96IW2 340 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 CFAP57Q96MR6 1250 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 SLC2A13Q96QE2 648 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 ECT2Q9H8V3 914 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 NHEJ1Q9H9Q4 299 aaPredicted RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 GRPEL1Q9HAV7 217 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 HPS4Q9NQG7 708 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 CNOT8Q9UFF9 292 aaKnown RBP15.17■□□□□ 0.02
SGCE-204ENST00000428696 SLC12A6Q9UHW9 1150 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 STAP1Q9ULZ2 295 aa15.17■□□□□ 0.02
SGCE-204ENST00000428696 PATJQ8NI35 1801 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 OTOL1A6NHN0 477 aaPredicted RBP15.16■□□□□ 0.02
SGCE-204ENST00000428696 APOEP02649 317 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms