RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ZNF658Q5TYW1 1059 aaPredicted RBP16.3■□□□□ 0.2
SEC13-210ENST00000428626 FYB2Q5VWT5 728 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 UBR7Q8N806 425 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 CCDC150Q8NCX0 1101 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 IPO4Q8TEX9 1081 aaKnown RBP16.3■□□□□ 0.2
SEC13-210ENST00000428626 FAXDC2Q96IV6 333 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 SPACA7Q96KW9 195 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 XPO6Q96QU8 1125 aaKnown RBP16.3■□□□□ 0.2
SEC13-210ENST00000428626 GABRG3Q99928 467 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 FSCN3Q9NQT6 498 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 CACNA2D2Q9NY47 1150 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 EVLQ9UI08 416 aaPredicted RBP16.3■□□□□ 0.2
SEC13-210ENST00000428626 IGHV1OR15-9A0A0B4J2B8 117 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 PCNX2A6NKB5 2137 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 RALAP11233 206 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
SEC13-210ENST00000428626 PSEN1P49768 467 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 TKTL1P51854 596 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 PDE4CQ08493 712 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 GOLGA8FQ08AF8 430 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 GOLGA8DPQ0D2H9 430 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 GEN1Q17RS7 908 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 GOLGA7BQ2TAP0 167 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 PREPLQ4J6C6 727 aaPredicted RBP16.29■□□□□ 0.2
SEC13-210ENST00000428626 TRIM61Q5EBN2 209 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 TCERG1LQ5VWI1 586 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 PEAR1Q5VY43 1037 aaPredicted RBP16.29■□□□□ 0.2
SEC13-210ENST00000428626 TRMT11Q7Z4G4 463 aaKnown RBP16.29■□□□□ 0.2
SEC13-210ENST00000428626 SYT12Q8IV01 421 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 CHPFQ8IZ52 775 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 ANKRD52Q8NB46 1076 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 SLC35C1Q96A29 364 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 ULBP1Q9BZM6 244 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 UBXN6Q9BZV1 441 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 TMEM9BQ9NQ34 198 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 PILRBQ9UKJ0 227 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 AGO1Q9UL18 857 aaKnown RBP16.29■□□□□ 0.2
SEC13-210ENST00000428626 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
SEC13-210ENST00000428626 ZFHX4Q86UP3 3567 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 PCDH15Q96QU1 1955 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 SLC16A3O15427 465 aaKnown RBP16.28■□□□□ 0.2
SEC13-210ENST00000428626 GABBR2O75899 941 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
SEC13-210ENST00000428626 CORO1AP31146 461 aaKnown RBP16.28■□□□□ 0.2
SEC13-210ENST00000428626 NOVA1P51513 510 aaKnown RBP16.28■□□□□ 0.2
SEC13-210ENST00000428626 MFAP3P55082 362 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 YWHAGP61981 247 aaKnown RBP eCLIP16.28■□□□□ 0.2
SEC13-210ENST00000428626 LRMPQ12912 555 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 CUL2Q13617 745 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 SH3PXD2AQ5TCZ1 1133 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 LYSMD4Q5XG99 296 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 PM20D1Q6GTS8 502 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 DENND1CQ8IV53 801 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 SLC41A1Q8IVJ1 513 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 GSDMAQ96QA5 445 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 TSPAN16Q9UKR8 245 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 ANGPTL2Q9UKU9 493 aa16.28■□□□□ 0.2
SEC13-210ENST00000428626 SLC12A8A0AV02 714 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 COG7P83436 770 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 SHC2P98077 582 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 FKBP3Q00688 224 aaKnown RBP16.27■□□□□ 0.2
SEC13-210ENST00000428626 RPL6Q02878 288 aaKnown RBP16.27■□□□□ 0.2
SEC13-210ENST00000428626 SPDYCQ5MJ68 293 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 ISM2Q6H9L7 571 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 NUDT18Q6ZVK8 323 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
SEC13-210ENST00000428626 UBA3Q8TBC4 463 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 TFAP2BQ92481 460 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 KAT5Q92993 513 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 PIWIL1Q96J94 861 aaKnown RBP16.27■□□□□ 0.2
SEC13-210ENST00000428626 MRGPRX1Q96LB2 322 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 ZSWIM1Q9BR11 485 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 RMND1Q9NWS8 449 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 MARCH2Q9P0N8 246 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 CYP8B1Q9UNU6 501 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 WASF3Q9UPY6 502 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 SLC27A6Q9Y2P4 619 aa16.27■□□□□ 0.2
SEC13-210ENST00000428626 IGF2RP11717 2491 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 O00370 1275 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 STX10O60499 249 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 TOP3BO95985 862 aaKnown RBP16.26■□□□□ 0.19
SEC13-210ENST00000428626 ZBED1O96006 694 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 CALCAP01258 141 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 ENGP17813 658 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 BMP6P22004 513 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 IL12RB1P42701 662 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 MAPK8P45983 427 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 BYSLQ13895 437 aaKnown RBP16.26■□□□□ 0.19
SEC13-210ENST00000428626 UAP1L1Q3KQV9 507 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 PKDCCQ504Y2 493 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 DAB2IPQ5VWQ8 1189 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 TMEM215Q68D42 235 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 SLC23A3Q6PIS1 610 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 TADA2BQ86TJ2 420 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 FAM217AQ8IXS0 508 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 TTC39CQ8N584 583 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 CDK5RAP1Q96SZ6 601 aaKnown RBP16.26■□□□□ 0.19
SEC13-210ENST00000428626 STON1Q9Y6Q2 735 aa16.26■□□□□ 0.19
SEC13-210ENST00000428626 ASPMQ8IZT6 3477 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 AKAP13Q12802 2813 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms