RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ARHGEF18Q6ZSZ5 1173 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 YTHDF3Q7Z739 585 aaKnown RBP14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 CCDC33Q8N5R6 958 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 CKAP2Q8WWK9 683 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 PCED1BQ96HM7 432 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 QKIQ96PU8 341 aaKnown RBP eCLIP14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 SLC2A13Q96QE2 648 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 PAAF1Q9BRP4 392 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 ULBP1Q9BZM6 244 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 ACSS3Q9H6R3 686 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 SAMD15Q9P1V8 674 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 FETUBQ9UGM5 382 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 CDH9Q9ULB4 789 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 USP3Q9Y6I4 520 aa14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 TDRD15B5MCY1 1934 aaKnown RBP14.52□□□□□ -0.09
APOBEC3D-202ENST00000427494 TSC2P49815 1807 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 FAM47DPA6NHR8 397 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 M0QYT0 321 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 SPAG7O75391 227 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 FBXO21O94952 628 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 POMCP01189 267 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 RAB27AP51159 221 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 SF3A3Q12874 501 aaKnown RBP eCLIP14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 NME3Q13232 169 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 RASA2Q15283 850 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 UPP1Q16831 310 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 SYPL2Q5VXT5 272 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 KCNT2Q6UVM3 1135 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 HFE2Q6ZVN8 426 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 IGDCC3Q8IVU1 814 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 CCDC197Q8NCU1 140 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 KLHDC9Q8NEP7 349 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 NPY6RQ99463 290 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 PAFAH2Q99487 392 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 SMOQ99835 787 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 KIF9Q9HAQ2 790 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 POPDC2Q9HBU9 364 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 SENP1Q9P0U3 644 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 MFHAS1Q9Y4C4 1052 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 ZNF638Q14966 1978 aaKnown RBP14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 NRP1O14786 923 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 AVILO75366 819 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 PIAS1O75925 651 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 TOMM70O94826 608 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 ODC1P11926 461 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 ELNP15502 786 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 MAGEA9P43362 315 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 DEUP1Q05D60 604 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 TIGD5Q53EQ6 642 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 C4orf22Q6V702 233 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 CCDC121Q6ZUS5 278 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 PSTKQ8IV42 348 aaKnown RBP14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 NT5C3BQ969T7 300 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 SMC6Q96SB8 1091 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 ELAC2Q9BQ52 826 aaKnown RBP14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 ETNK1Q9HBU6 452 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 TMPRSS4Q9NRS4 437 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 DTLQ9NZJ0 730 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 RCOR3Q9P2K3 495 aaPredicted RBP14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 TEX264Q9Y6I9 313 aa14.51□□□□□ -0.09
APOBEC3D-202ENST00000427494 GOLGA6L7A0A1B0GV03 622 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 KBTBD13C9JR72 458 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 H3BRJ5 948 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 I3L4J1 428 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 CAPN9O14815 690 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 ALDH1A1P00352 501 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 APRTP07741 180 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 PCSK1P29120 753 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 LIG3P49916 1009 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 DAOAP59103 153 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 YWHAGP61981 247 aaKnown RBP eCLIP14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 CAP1Q01518 475 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 DSC3Q14574 896 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 LPIN1Q14693 890 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 GPRIN1Q7Z2K8 1008 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 BNIPLQ7Z465 357 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 PIGWQ7Z7B1 504 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 C4orf33Q8N1A6 199 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 ANKS4BQ8N8V4 417 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 SLC7A14Q8TBB6 771 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 RNF139Q8WU17 664 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 SGSM3Q96HU1 749 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 KCNK16Q96T55 309 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 PAIP2Q9BPZ3 127 aaKnown RBP14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 DHRS4Q9BTZ2 278 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 FRMD8Q9BZ67 464 aaPredicted RBP14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 ARHGEF4Q9NR80 690 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 NOD1Q9Y239 953 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 PTCH2Q9Y6C5 1203 aa14.5□□□□□ -0.09
APOBEC3D-202ENST00000427494 A0A1W2PPM1 405 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 PRPF4O43172 522 aaKnown RBP eCLIP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 ZNF623O75123 536 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 GCATO75600 419 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 MSH2P43246 934 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 CACNA2D1P54289 1103 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 PAN2Q504Q3 1202 aaKnown RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 HEATR6Q6AI08 1181 aaKnown RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 CCSAPQ6IQ19 270 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms