RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 FAM156AQ8NDB6 213 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 NGDNQ8NEJ9 315 aaKnown RBP5.71□□□□□ -1.5
LINC00458-202ENST00000427299 KLHDC4Q8TBB5 520 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 RILPL2Q969X0 211 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 B3GNT5Q9BYG0 378 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 PDCL3Q9H2J4 239 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 FAM204AQ9H8W3 233 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 DIAPH3Q9NSV4 1193 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 POLHQ9Y253 713 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 ADAMTSL3P82987 1691 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 SYCE3A1L190 88 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 LRRC14BA6NHZ5 514 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 NT5C1B-RDH14C9J2C7 533 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 IFRD1O00458 451 aaPredicted RBP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 PPP6CO00743 305 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 JTBO76095 146 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 HSPA4P34932 840 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 UBE2HP62256 183 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 CHAF1AQ13111 956 aaPredicted RBP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 SNAPC2Q13487 334 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 DHX8Q14562 1220 aaKnown RBP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 SAFBQ15424 915 aaKnown RBP eCLIP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 TBCCQ15814 346 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 MTHFSDQ2M296 383 aaKnown RBP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 KHDC1Q4VXA5 237 aaKnown RBP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 TAF2Q6P1X5 1199 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 SLC30A10Q6XR72 485 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 FAM109AQ8N4B1 249 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 C3orf20Q8ND61 904 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 GPT2Q8TD30 523 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 OTUD7AQ8TE49 926 aaPredicted RBP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 CDK5RAP3Q96JB5 506 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 ZSCAN31Q96LW9 406 aaPredicted RBP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 ARPC5LQ9BPX5 153 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 QTRT1Q9BXR0 403 aaKnown RBP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 EXOC6BQ9Y2D4 811 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 TBC1D30Q9Y2I9 924 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 TJP1Q07157 1748 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 COL22A1Q8NFW1 1626 aaPredicted RBP5.7□□□□□ -1.5
LINC00458-202ENST00000427299 ANKRD36CQ5JPF3 1778 aa5.7□□□□□ -1.5
LINC00458-202ENST00000427299 ECM29Q5VYK3 1845 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 ARIH2O95376 493 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 TOP3BO95985 862 aaKnown RBP5.69□□□□□ -1.5
LINC00458-202ENST00000427299 FTLP02792 175 aaPredicted RBP5.69□□□□□ -1.5
LINC00458-202ENST00000427299 SLC5A1P13866 664 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 ZKSCAN1P17029 563 aaPredicted RBP5.69□□□□□ -1.5
LINC00458-202ENST00000427299 MALP21145 153 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 PAX3P23760 479 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 HOXC9P31274 260 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 SEMA5AQ13591 1074 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 ANKRD1Q15327 319 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 TAF7Q15545 349 aaPredicted RBP5.69□□□□□ -1.5
LINC00458-202ENST00000427299 KRT24Q2M2I5 525 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 COBLL1Q53SF7 1204 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 CCDC93Q567U6 631 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 CEP78Q5JTW2 689 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 RBM20Q5T481 1227 aaKnown RBP5.69□□□□□ -1.5
LINC00458-202ENST00000427299 SLC18B1Q6NT16 456 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 KCNH5Q8NCM2 988 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 PSD4Q8NDX1 1056 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 DENND1AQ8TEH3 1009 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 WASF1Q92558 559 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 TBC1D5Q92609 795 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 FAM167AQ96KS9 214 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 SH2D3AQ9BRG2 576 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 TM6SF1Q9BZW5 370 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 UBA5Q9GZZ9 404 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 ATP6V0A4Q9HBG4 840 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 ARHGEF3Q9NR81 526 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 MRPS18AQ9NVS2 196 aaKnown RBP5.69□□□□□ -1.5
LINC00458-202ENST00000427299 RLIMQ9NVW2 624 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 SIDT1Q9NXL6 827 aaKnown RBP5.69□□□□□ -1.5
LINC00458-202ENST00000427299 SH3BP4Q9P0V3 963 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 SMC3Q9UQE7 1217 aa5.69□□□□□ -1.5
LINC00458-202ENST00000427299 LRRFIP2Q9Y608 721 aaKnown RBP5.69□□□□□ -1.5
LINC00458-202ENST00000427299 JCADQ9P266 1359 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 UQCRHLA0A096LP55 91 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 F2RL2O00254 374 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 STX6O43752 255 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 NXPH3O95157 252 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 NTN1O95631 604 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 DDX58O95786 925 aaKnown RBP5.68□□□□□ -1.5
LINC00458-202ENST00000427299 CHEK2O96017 543 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 UQCRHP07919 91 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 TYRP14679 529 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 SFPQP23246 707 aaKnown RBP eCLIP5.68□□□□□ -1.5
LINC00458-202ENST00000427299 PSMA5P28066 241 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 FAM193AP78312 1265 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 TCF15Q12870 199 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 MTX1Q13505 466 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 PKP1Q13835 747 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 AMOTQ4VCS5 1084 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 VPS53Q5VIR6 699 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 CRELD2Q6UXH1 353 aaPredicted RBP5.68□□□□□ -1.5
LINC00458-202ENST00000427299 MAEAQ7L5Y9 396 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 TECPR1Q7Z6L1 1165 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 C11orf96Q7Z7L8 435 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 COL23A1Q86Y22 540 aaPredicted RBP5.68□□□□□ -1.5
LINC00458-202ENST00000427299 C16orf71Q8IYS4 520 aaPredicted RBP5.68□□□□□ -1.5
LINC00458-202ENST00000427299 CLASRPQ8N2M8 674 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms