RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 XKR3Q5GH77 459 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ARHGAP22Q7Z5H3 698 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 RORBQ92753 470 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 TEX13BQ9BXU2 312 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PRRG3Q9BZD7 231 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ELP3Q9H9T3 547 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 ZDHHC9Q9Y397 364 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 PCDHGA4Q9Y5G9 962 aa12.89□□□□□ -0.35
HDLBP-214ENST00000427183 LOC100506127A0A0U1RQW1 187 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 CD4P01730 458 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 FDFT1P37268 417 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 KLHL12Q53G59 568 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 SPANXN2Q5MJ10 180 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 ATAD3BQ5T9A4 648 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 KRT74Q7RTS7 529 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 CELF1Q92879 486 aaKnown RBP12.88□□□□□ -0.35
HDLBP-214ENST00000427183 FAR2Q96K12 515 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 CLOCKO15516 846 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 DYRK3O43781 588 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 UMPSP11172 480 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 FGFR1P11362 822 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 STIP1P31948 543 aaKnown RBP12.88□□□□□ -0.35
HDLBP-214ENST00000427183 CCNG1P51959 295 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 RMND5BQ96G75 393 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-214ENST00000427183 PAFAH2Q99487 392 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 IDH3BO43837 385 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 PDE9AO76083 593 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 IFNA14P01570 189 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 ENO2P09104 434 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-214ENST00000427183 HOXD10P28358 340 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 FAM98BQ52LJ0 330 aaKnown RBP12.88□□□□□ -0.35
HDLBP-214ENST00000427183 STK32CQ86UX6 486 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 EID3Q8N140 333 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 TPCN2Q8NHX9 752 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 RNF145Q96MT1 663 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 C7orf25Q9BPX7 421 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 ELOVL6Q9H5J4 265 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDLBP-214ENST00000427183 LIMD1Q9UGP4 676 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 PCP4L1A6NKN8 68 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 MYL12BO14950 172 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 KRT6AP02538 564 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 CNPP09543 421 aaKnown RBP12.88□□□□□ -0.35
HDLBP-214ENST00000427183 C3orf20Q8ND61 904 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 TMC2Q8TDI7 906 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 MYLK2Q9H1R3 596 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 PABPC3Q9H361 631 aaKnown RBP12.88□□□□□ -0.35
HDLBP-214ENST00000427183 GPAMQ9HCL2 828 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 TMEM8AQ9HCN3 771 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 COQ6Q9Y2Z9 468 aa12.88□□□□□ -0.35
HDLBP-214ENST00000427183 OR6B1O95007 311 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 SGPL1O95470 568 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 RAG1P15918 1043 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 RALGDSQ12967 914 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 EFCAB12Q6NXP0 572 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 ARMCX6Q7L4S7 300 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 DCP1BQ8IZD4 617 aaKnown RBP12.87□□□□□ -0.35
HDLBP-214ENST00000427183 CAMKK1Q8N5S9 505 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 EHD3Q9NZN3 535 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 COPG2Q9UBF2 871 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 EFCAB10A6NFE3 127 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 H7C1W4 665 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 PSMD11O00231 422 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 PDIA5Q14554 519 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 TSNQ15631 228 aaKnown RBP12.87□□□□□ -0.35
HDLBP-214ENST00000427183 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-214ENST00000427183 CBWD2Q8IUF1 395 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 ARL10Q8N8L6 244 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 TMEM121Q9BTD3 319 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 MOV10L1Q9BXT6 1211 aaKnown RBP12.87□□□□□ -0.35
HDLBP-214ENST00000427183 CLPBQ9H078 707 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 MAP10Q9P2G4 905 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 MRPS7Q9Y2R9 242 aaKnown RBP12.87□□□□□ -0.35
HDLBP-214ENST00000427183 UBDO15205 165 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 LTFP02788 710 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 MYL12AP19105 171 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 PRKCEQ02156 737 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 DGUOKQ16854 277 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 NDUFAF6Q330K2 333 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 KLHDC7AQ5VTJ3 777 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 TDRD10Q5VZ19 366 aaKnown RBP12.87□□□□□ -0.35
HDLBP-214ENST00000427183 POU5F2Q8N7G0 328 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 FER1L4A9Z1Z3 1794 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 SDR42E2A6NKP2 422 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 CPA3P15088 417 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 WEE1P30291 646 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 HK2P52789 917 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 PTSQ03393 145 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 SLITRK1Q96PX8 696 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 ACTR8Q9H981 624 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 TMBIM4Q9HC24 238 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 PIH1D1Q9NWS0 290 aaKnown RBP12.87□□□□□ -0.35
HDLBP-214ENST00000427183 AKAP5P24588 427 aa12.87□□□□□ -0.35
HDLBP-214ENST00000427183 GRK3P35626 688 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms