RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 TRPM5Q9NZQ8 1165 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 GMIPQ9P107 970 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 TJP2Q9UDY2 1190 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 NR2E1Q9Y466 385 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.79□□□□□ -1.16
LINC01049-201ENST00000426840 PATJQ8NI35 1801 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 OBSL1O75147 1896 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 NCANO14594 1321 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 A0A1W2PQH9 124 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 C2orf78A6NCI8 922 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 PIK3R2O00459 728 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 CDK2AP1O14519 115 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 OLFM2O95897 454 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ZBED1O96006 694 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 OAS1P00973 400 aaKnown RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 CCDC172P0C7W6 258 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 SKILP12757 684 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 LCP1P13796 627 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 PFKLP17858 780 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 HDCP19113 662 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 FCARP24071 287 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 DDX6P26196 483 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 HNRNPH3P31942 346 aaKnown RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 CASP14P31944 242 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 VIPR2P41587 438 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ACADSBP45954 432 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 GABRB2P47870 512 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 PDE6CP51160 858 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 DAOAP59103 153 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 NOMO3P69849 1222 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ZXDBP98169 803 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 INSM1Q01101 510 aaPredicted RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 CRTC2Q53ET0 693 aaPredicted RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ARHGAP15Q53QZ3 475 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 SFMBT2Q5VUG0 894 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 HGSNATQ68CP4 663 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 TANGO2Q6ICL3 276 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 PARM1Q6UWI2 310 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 HFE2Q6ZVN8 426 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ZNF571Q7Z3V5 609 aaPredicted RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 PASD1Q8IV76 773 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 CMTM8Q8IZV2 173 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 GJD3Q8N144 294 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 SLC44A3Q8N4M1 653 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ZNF276Q8N554 614 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ARL14EPQ8N8R7 260 aaPredicted RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 MAB21L3Q8N8X9 362 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 TDRD5Q8NAT2 981 aaKnown RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 TSEN2Q8NCE0 465 aaKnown RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 TMEM35BQ8NCS4 154 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 C1orf131Q8NDD1 294 aaKnown RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 PDZD8Q8NEN9 1154 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ZNF397Q8NF99 534 aaPredicted RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 SLC30A5Q8TAD4 765 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ZSCAN18Q8TBC5 510 aaPredicted RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 RSAD2Q8WXG1 361 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 SYN2Q92777 582 aaPredicted RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 FGF14Q92915 247 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 SMARCD2Q92925 531 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 RSPRY1Q96DX4 576 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 MRFAP1L1Q96HT8 127 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 ASB16Q96NS5 453 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 LRRC3BQ96PB8 259 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 SLITRK1Q96PX8 696 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 GCNAQ96QF7 691 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 CPXM1Q96SM3 734 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 PLA2G2FQ9BZM2 168 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 NUCKS1Q9H1E3 243 aaKnown RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 KCNK12Q9HB15 430 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 CNGB3Q9NQW8 809 aa7.78□□□□□ -1.16
LINC01049-201ENST00000426840 TLR8Q9NR97 1041 aaKnown RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 LUC7L2Q9Y383 392 aaKnown RBP7.78□□□□□ -1.16
LINC01049-201ENST00000426840 YJEFN3A6XGL0 299 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 E5RJQ4 531 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 E7ENQ6 273 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 PAPSS1O43252 624 aaPredicted RBP7.77□□□□□ -1.17
LINC01049-201ENST00000426840 ECI2O75521 394 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 LSM8O95777 96 aaKnown RBP7.77□□□□□ -1.17
LINC01049-201ENST00000426840 TBX18O95935 607 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 ABL1P00519 1130 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 ERBB2P04626 1255 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 FYNP06241 537 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 ASGR2P07307 311 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 UNGP13051 313 aaPredicted RBP7.77□□□□□ -1.17
LINC01049-201ENST00000426840 RARGP13631 454 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 TNFAIP3P21580 790 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 YWHAGP61981 247 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC01049-201ENST00000426840 GOLGA8FQ08AF8 430 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 GOLGA8DPQ0D2H9 430 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 ADIGQ0VDE8 80 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 PTP4A2Q12974 167 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 PDCLQ13371 301 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 HTR4Q13639 388 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 TRIM14Q14142 442 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 ASIC2Q16515 512 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 PTPN20Q4JDL3 420 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 HECTD3Q5T447 861 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 BSPRYQ5W0U4 402 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 WDR59Q6PJI9 974 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 TMC6Q7Z403 805 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms