RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CPXM1Q96SM3 734 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 LHX5Q9H2C1 402 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 ZNF510Q9Y2H8 683 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 HBS1LQ9Y450 684 aaKnown RBP23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 DAAM1Q9Y4D1 1078 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 MYO18AQ92614 2054 aaKnown RBP23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 GFPT2O94808 682 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 NCAM1P13591 858 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 EIF2DP41214 584 aaKnown RBP23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 CXCL12P48061 93 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 PPP2R5DQ14738 602 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 IQCB1Q15051 598 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SKOR2Q2VWA4 1001 aaPredicted RBP23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 FBXO43Q4G163 708 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 DENND1CQ8IV53 801 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 NAT16Q8N8M0 369 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 PPP1R13BQ96KQ4 1090 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SPAG5Q96R06 1193 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 ERGIC2Q96RQ1 377 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 PNKPQ96T60 521 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 BBS2Q9BXC9 721 aa23.32■■□□□ 1.32
PTCHD3P2-201ENST00000424937 JAM2P57087 298 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TRIP4Q15650 581 aaPredicted RBP23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 ZSCAN23Q3MJ62 389 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 MAMSTRQ6ZN01 415 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 NOP9Q86U38 636 aaKnown RBP23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 ETFBKMTQ8IXQ9 262 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 EPS8L1Q8TE68 723 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 BHMTQ93088 406 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 ARHGEF4Q9NR80 690 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 C2orf42Q9NWW7 574 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 MARK1Q9P0L2 795 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 AGO1Q9UL18 857 aaKnown RBP23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 R4GN57 208 aa23.31■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TULP3O75386 442 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 KAT7O95251 611 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 APODP05090 189 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TYRP14679 529 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SOX5P35711 763 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 NBL1P41271 181 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 HARS2P49590 506 aaKnown RBP23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SEC13P55735 322 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 MESP2Q0VG99 397 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 ZNF528Q3MIS6 628 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 PTPN20Q4JDL3 420 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 RPLP0P6Q8NHW5 317 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 DQX1Q8TE96 717 aaKnown RBP23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 IPO4Q8TEX9 1081 aaKnown RBP23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 PIWIL1Q96J94 861 aaKnown RBP23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TRIM62Q9BVG3 475 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SYNCQ9H7C4 482 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 CBX8Q9HC52 389 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 NAALADL1Q9UQQ1 740 aa23.3■■□□□ 1.32
PTCHD3P2-201ENST00000424937 FAM170AA1A519 330 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 CAPN9O14815 690 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 ERBB2P04626 1255 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 FYNP06241 537 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 CHKAP35790 457 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 ZC3H14Q6PJT7 736 aaKnown RBP23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 FAM183BPQ6ZVS7 135 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SFTPA1Q8IWL2 248 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TMEM35BQ8NCS4 154 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 DDX1Q92499 740 aaKnown RBP23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 POPDC2Q9HBU9 364 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 DNAJC17Q9NVM6 304 aaKnown RBP23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 WDR35Q9P2L0 1181 aa23.29■■□□□ 1.32
PTCHD3P2-201ENST00000424937 K7EQS6 105 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TEX33O43247 280 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 CACNG3O60359 315 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 ATG13O75143 517 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 MMEP08473 750 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 STAT1P42224 750 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SNX16P57768 344 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 FILIP1LQ4L180 1135 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 OR6B2Q6IFH4 312 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TAC4Q86UU9 113 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 LUZP1Q86V48 1076 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 PHTF2Q8N3S3 785 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 ADAM32Q8TC27 787 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SLC20A1Q8WUM9 679 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SERPINB11Q96P15 392 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 XPO6Q96QU8 1125 aaKnown RBP23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 RTN4Q9NQC3 1192 aaKnown RBP23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 PLK2Q9NYY3 685 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 DEC1Q9P2X7 70 aa23.28■■□□□ 1.32
PTCHD3P2-201ENST00000424937 EML5Q05BV3 1969 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 CHURC1-FNTBB4DL54 471 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 PAPSS2O95340 614 aaPredicted RBP23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 IGLV3-27P01718 113 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TDGF1P13385 188 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 CDH5P33151 784 aaPredicted RBP23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 GRIA2P42262 883 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TBX4P57082 545 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 YWHAZP63104 245 aaKnown RBP23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TPM4P67936 248 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 TAF5Q15542 800 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 SYPL2Q5VXT5 272 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 GRAMD4Q6IC98 578 aa23.27■■□□□ 1.32
PTCHD3P2-201ENST00000424937 BEND5Q7L4P6 421 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms