RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ELF2Q15723 593 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 DPCR1Q3MIW9 517 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 PKDCCQ504Y2 493 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 USP39Q53GS9 565 aaKnown RBP15.92■□□□□ 0.14
USB1-202ENST00000423271 EGFLAMQ63HQ2 1017 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 PM20D1Q6GTS8 502 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 RSRC2Q7L4I2 434 aaKnown RBP15.92■□□□□ 0.14
USB1-202ENST00000423271 TRIM59Q8IWR1 403 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 ARHGAP18Q8N392 663 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 MLKLQ8NB16 471 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 OLIG1Q8TAK6 271 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 NETO1Q8TDF5 533 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 XPO6Q96QU8 1125 aaKnown RBP15.92■□□□□ 0.14
USB1-202ENST00000423271 CDK5RAP1Q96SZ6 601 aaKnown RBP15.92■□□□□ 0.14
USB1-202ENST00000423271 RTKNQ9BST9 563 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 LRRC4Q9HBW1 653 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 RXFP3Q9NSD7 469 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 MARCH2Q9P0N8 246 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 WDR35Q9P2L0 1181 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 THADAQ6YHU6 1953 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 CNOT1A5YKK6 2376 aaKnown RBP15.92■□□□□ 0.14
USB1-202ENST00000423271 NUP205Q92621 2012 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 TCRBV21S2A2A0A5A6 115 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 SLC12A8A0AV02 714 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 PRRT4C9JH25 899 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 SLC30A4O14863 429 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 ZNF806P0C7X5 589 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 SETSIPP0DME0 302 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 BRD2P25440 801 aaKnown RBP15.91■□□□□ 0.14
USB1-202ENST00000423271 WASP42768 502 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 COG7P83436 770 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 KCNH2Q12809 1159 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 PREPLQ4J6C6 727 aaPredicted RBP15.91■□□□□ 0.14
USB1-202ENST00000423271 AASDHQ4L235 1098 aaPredicted RBP15.91■□□□□ 0.14
USB1-202ENST00000423271 PLA2G2CQ5R387 149 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 PMS2CLQ68D20 193 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 TCEAL6Q6IPX3 200 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 CAVIN1Q6NZI2 390 aaKnown RBP15.91■□□□□ 0.14
USB1-202ENST00000423271 RRAGAQ7L523 313 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 HMGB4Q8WW32 186 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 RLN3Q8WXF3 142 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 TCEAL3Q969E4 200 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 MED15Q96RN5 788 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 ACOX2Q99424 681 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 SRRTQ9BXP5 876 aaKnown RBP15.91■□□□□ 0.14
USB1-202ENST00000423271 POLMQ9NP87 494 aaPredicted RBP15.91■□□□□ 0.14
USB1-202ENST00000423271 PCDHGA5Q9Y5G8 931 aa15.91■□□□□ 0.14
USB1-202ENST00000423271 YJEFN3A6XGL0 299 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 E7ENQ6 273 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 PIK3R2O00459 728 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 P4HA2O15460 535 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 GABBR2O75899 941 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 ALDH1A2O94788 518 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 RHOBTB1O94844 696 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 PAEPP09466 180 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 CISD3P0C7P0 127 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 LCP1P13796 627 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 DGKGP49619 791 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 RGS7P49802 495 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 MARSP56192 900 aaKnown RBP15.9■□□□□ 0.14
USB1-202ENST00000423271 CREB5Q02930 508 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 KLHL40Q2TBA0 621 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 FYB2Q5VWT5 728 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 LCLAT1Q6UWP7 414 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 DENND1CQ8IV53 801 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 FRMD1Q8N878 549 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 C12orf50Q8NA57 414 aaPredicted RBP15.9■□□□□ 0.14
USB1-202ENST00000423271 RBBP8NLQ8NC74 664 aaPredicted RBP15.9■□□□□ 0.14
USB1-202ENST00000423271 EDEM1Q92611 657 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 ERLEC1Q96DZ1 483 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 KREMEN1Q96MU8 473 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 INTS2Q9H0H0 1204 aaKnown RBP15.9■□□□□ 0.14
USB1-202ENST00000423271 BCCIPQ9P287 314 aaKnown RBP eCLIP15.9■□□□□ 0.14
USB1-202ENST00000423271 RWDD2AQ9UIY3 292 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 AGO1Q9UL18 857 aaKnown RBP15.9■□□□□ 0.14
USB1-202ENST00000423271 STRIP2Q9ULQ0 834 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.9■□□□□ 0.14
USB1-202ENST00000423271 STARD13Q9Y3M8 1113 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 GON4LQ3T8J9 2241 aa15.9■□□□□ 0.14
USB1-202ENST00000423271 M0QYV0 167 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 GNA14O95837 355 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 PENKP01210 267 aaPredicted RBP15.89■□□□□ 0.13
USB1-202ENST00000423271 AFPP02771 609 aaKnown RBP15.89■□□□□ 0.13
USB1-202ENST00000423271 HOXB2P14652 356 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 PTMSP20962 102 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 P2RY2P41231 377 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 ZNF132P52740 706 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 DAOAP59103 153 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 CETN1Q12798 172 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 BSPRYQ5W0U4 402 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 PMF1Q6P1K2 205 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 NUDT18Q6ZVK8 323 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 TRMT11Q7Z4G4 463 aaKnown RBP15.89■□□□□ 0.13
USB1-202ENST00000423271 FMNL3Q8IVF7 1028 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 SIX6OS1Q8N1H7 587 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 EHBP1Q8NDI1 1231 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 KCNV2Q8TDN2 545 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 KCTD13Q8WZ19 329 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 DCLK3Q9C098 648 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 SFMBT1Q9UHJ3 866 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms