RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 CREBRFQ8IUR6 639 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 NUP93Q8N1F7 819 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 TMEM105Q8N8V8 129 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 STKLD1Q8NE28 680 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 BPIFB1Q8TDL5 484 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 SEMA4DQ92854 862 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 SLC35C1Q96A29 364 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 FAM122AQ96E09 287 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 CYFIP2Q96F07 1278 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 SMARCD1Q96GM5 515 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 HEXIM2Q96MH2 286 aaKnown RBP8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 SLITRK1Q96PX8 696 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 ZNF518BQ9C0D4 1074 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 CLSTN2Q9H4D0 955 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 FAM124BQ9H5Z6 455 aaPredicted RBP8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 APOBEC3GQ9HC16 384 aaKnown RBP8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 TRPC7Q9HCX4 862 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 DMAP1Q9NPF5 467 aaPredicted RBP8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 TRPV5Q9NQA5 729 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 TDP1Q9NUW8 608 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 RWDD2AQ9UIY3 292 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 TRIM33Q9UPN9 1127 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 COQ4Q9Y3A0 265 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 TSC2P49815 1807 aa8.01□□□□□ -1.13
AC012560.1-202ENST00000421324 FAM170BA6NMN3 283 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 PMM2O15305 246 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 P4HA2O15460 535 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 LRRN2O75325 713 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 CILPO75339 1184 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 CKMP06732 381 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 CCDC130P13994 396 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 GLULP15104 373 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 PFKLP17858 780 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 ITGB7P26010 798 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 ADORA2BP29275 332 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 FMO5P49326 533 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 MLLT6P55198 1093 aaPredicted RBP8□□□□□ -1.13
AC012560.1-202ENST00000421324 FCHO2Q0JRZ9 810 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 INCA1Q0VD86 236 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 IFRD2Q12894 506 aaPredicted RBP8□□□□□ -1.13
AC012560.1-202ENST00000421324 LRMPQ12912 555 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 UBXN2BQ14CS0 331 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 CBWD6Q4V339 395 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 ZNF394Q53GI3 561 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 CBWD3Q5JTY5 395 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 CBWD5Q5RIA9 395 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 TPRG1Q6ZUI0 275 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 PAQR9Q6ZVX9 377 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 FUKQ8N0W3 1084 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 ARL14EPQ8N8R7 260 aaPredicted RBP8□□□□□ -1.13
AC012560.1-202ENST00000421324 C12orf29Q8N999 325 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 TTC16Q8NEE8 873 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 PDZD8Q8NEN9 1154 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 SLC2A14Q8TDB8 520 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 USP13Q92995 863 aaPredicted RBP8□□□□□ -1.13
AC012560.1-202ENST00000421324 RSPRY1Q96DX4 576 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 CYP2S1Q96SQ9 504 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 KCNK16Q96T55 309 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 HNRNPABQ99729 332 aaKnown RBP8□□□□□ -1.13
AC012560.1-202ENST00000421324 TTLL2Q9BWV7 592 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 OSBPL6Q9BZF3 934 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 RBSNQ9H1K0 784 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 NUP62CLQ9H1M0 184 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 KIF9Q9HAQ2 790 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 TPSG1Q9NRR2 321 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 HEBP1Q9NRV9 189 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 GKN1Q9NS71 199 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 KRT82Q9NSB4 513 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 CISHQ9NSE2 258 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 LMBRD1Q9NUN5 540 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 FAM49BQ9NUQ9 324 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 COMMD8Q9NX08 183 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 HMGXB4Q9UGU5 601 aa8□□□□□ -1.13
AC012560.1-202ENST00000421324 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8□□□□□ -1.13
AC012560.1-202ENST00000421324 ZNF840PA6NDX5 716 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 A6NHS1 94 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 FZD6O60353 706 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 PRAMEF12O95522 483 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 DCNP07585 359 aaKnown RBP7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 FAM200BP0CF97 657 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 CD72P21854 359 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 TBXAS1P24557 533 aaPredicted RBP7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 CACNA2D1P54289 1103 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 MAP3K7CLP57077 242 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 SLC8A3P57103 927 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 ATP11AP98196 1134 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 AMPD2Q01433 879 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 NRG1Q02297 640 aaPredicted RBP7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 TAF10Q12962 218 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 CUL2Q13617 745 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 ZNF268Q14587 947 aaPredicted RBP7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 NKAPLQ5M9Q1 402 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 CWF19L1Q69YN2 538 aaKnown RBP7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 C1orf228Q6PIY5 440 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 ZNF438Q7Z4V0 828 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 DTWD2Q8NBA8 298 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 PJA1Q8NG27 643 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 OVCA2Q8WZ82 227 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 FAM3CQ92520 227 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 FBXO32Q969P5 355 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms