RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PPFIA2O75334 1257 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 RRM1P23921 792 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 SERPINA4P29622 427 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 CYP2C18P33260 490 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 CEP68Q76N32 757 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 TOP6BLQ8N6T0 577 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 SERAC1Q96JX3 654 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 Q9Y3F1 56 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 CNTNAP1P78357 1384 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 DNM1LO00429 736 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 PDCLQ13371 301 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 UGCGQ16739 394 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 SAPCD2Q86UD0 394 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 ADAM32Q8TC27 787 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 MYLPFQ96A32 169 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 LRRC37BQ96QE4 947 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 CARD9Q9H257 536 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 CERS4Q9HA82 394 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 SLC27A5Q9Y2P5 690 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 INSL6Q9Y581 213 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 ABCA3Q99758 1704 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 VPS26AO75436 327 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-206ENST00000421141 SERPINA13PQ6UXR4 307 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 DENND1CQ8IV53 801 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 PHIPQ8WWQ0 1821 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 A0A0G2JND7 137 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 CLASP2O75122 1294 aaKnown RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 PFKMP08237 780 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 ESRRAP11474 423 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 HIRAP54198 1017 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 AGAP9Q5VTM2 703 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 CCNJLQ8IV13 435 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 ZNF669Q96BR6 464 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 LENG1Q96BZ8 264 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 NIFKQ9BYG3 293 aaKnown RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 RBM22Q9NW64 420 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 WWOXQ9NZC7 414 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 UBA2Q9UBT2 640 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 SDR42E2A6NKP2 422 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 SULT2A1Q06520 285 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 NT5DC3Q86UY8 548 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 TBCBQ99426 244 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 MRGBPQ9NV56 204 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 TBC1D14Q9P2M4 693 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 VANGL2Q9ULK5 521 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 MRPS17Q9Y2R5 130 aaKnown RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 CCL16O15467 120 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 CCND3P30281 292 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 LBX1P52954 281 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 DUSP4Q13115 394 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 KIAA1324Q6UXG2 1013 aaKnown RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 PSMC3IPQ9P2W1 217 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 SEPT3Q9UH03 358 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 SYN3O14994 580 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 SOAT2O75908 522 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 TGM3Q08188 693 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 FIGNQ5HY92 759 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 FAM46CQ5VWP2 391 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 CNKSR3Q6P9H4 555 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 C16orf59Q7L2K0 433 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 COL18A1P39060 1754 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 ITGB3BPQ13352 177 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 GRB14Q14449 540 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 CCL14Q16627 93 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 PRDM16Q9HAZ2 1276 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 MAFBQ9Y5Q3 323 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-206ENST00000421141 RPS6KL1Q9Y6S9 549 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 ADGRA2Q96PE1 1338 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 MEI4A8MW99 385 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 NT5DC1Q5TFE4 455 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 VSTM1Q6UX27 236 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 NLNQ9BYT8 704 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 RBPJLQ9UBG7 517 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 RNF112Q9ULX5 631 aa11.06□□□□□ -0.64
PTCH1-206ENST00000421141 GLP2RO95838 553 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 NUMBP49757 651 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ABCE1P61221 599 aaKnown RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 MAPRE2Q15555 327 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 C2CD6Q53TS8 623 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ZSWIM1Q9BR11 485 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 RNF19AQ9NV58 838 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ABHD14A-ACY1A0A1B0GW23 586 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ARL5CA6NH57 179 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ANKRD63C9JTQ0 380 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 GABRR2P28476 465 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 C21orf59P57076 290 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 POU4F1Q01851 419 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 EMC1Q8N766 993 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 HJURPQ8NCD3 748 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 FAM167BQ9BTA0 163 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 PPARGC1AQ9UBK2 798 aaKnown RBP11.05□□□□□ -0.64
PTCH1-206ENST00000421141 CLUHO75153 1309 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 SMIM22K7EJ46 135 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 ZNF185O15231 689 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 LYPLA2O95372 231 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 HALP42357 657 aa11.05□□□□□ -0.64
PTCH1-206ENST00000421141 RAP1GDS1P52306 607 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms