RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SLC27A6Q9Y2P4 619 aa17.75■□□□□ 0.43
UPF3AP3-201ENST00000420996 STON1Q9Y6Q2 735 aa17.75■□□□□ 0.43
UPF3AP3-201ENST00000420996 SPEGQ15772 3267 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 NPC1O15118 1278 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 SH3BP5O60239 455 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 CENPBP07199 599 aaPredicted RBP17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 SLFN14P0C7P3 912 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 CD6P30203 668 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 PIK3CAP42336 1068 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 KIF11P52732 1056 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 TRIP6Q15654 476 aaKnown RBP17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 C1orf220Q5T0J3 134 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 LRSAM1Q6UWE0 723 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 CAMK1GQ96NX5 476 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 NT5C1AQ9BXI3 368 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 ZDHHC5Q9C0B5 715 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 CYP3A43Q9HB55 503 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 SERTAD1Q9UHV2 236 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 NAGPAQ9UK23 515 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 FRMD4BQ9Y2L6 1034 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 NFE2L3Q9Y4A8 694 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 PCDHB9Q9Y5E1 797 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 ASPMQ8IZT6 3477 aa17.74■□□□□ 0.43
UPF3AP3-201ENST00000420996 PENKP01210 267 aaPredicted RBP17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 KLKB1P03952 638 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 PDIA4P13667 645 aaKnown RBP17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 MAOBP27338 520 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 CHKAP35790 457 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 RING1Q06587 406 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 STARD3Q14849 445 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 FOXD4L6Q3SYB3 417 aaPredicted RBP17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 FUT11Q495W5 492 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 KMT5BQ4FZB7 885 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 FOXD4L5Q5VV16 416 aaPredicted RBP17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 CEP135Q66GS9 1140 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 ATL3Q6DD88 541 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 FOXD4L3Q6VB84 417 aaPredicted RBP17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 CCDC186Q7Z3E2 898 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 SCD5Q86SK9 330 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 FOXD4L4Q8WXT5 416 aaPredicted RBP17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 DNASE2BQ8WZ79 361 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 P2RY11Q96G91 374 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 PAGE5Q96GU1 130 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 IMPG2Q9BZV3 1241 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 PRDM16Q9HAZ2 1276 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 ITM2CQ9NQX7 267 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 WSB2Q9NYS7 404 aaPredicted RBP17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 CLIC5Q9NZA1 410 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 USP36Q9P275 1121 aaKnown RBP17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 THAP10Q9P2Z0 257 aaPredicted RBP17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 USP3Q9Y6I4 520 aa17.73■□□□□ 0.43
UPF3AP3-201ENST00000420996 MAPK13O15264 365 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 ACTN4O43707 911 aaKnown RBP17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 CAPNS1P04632 268 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 RALAP11233 206 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 HOXB3P14651 431 aaPredicted RBP17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 VAMP7P51809 220 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 COG7P83436 770 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 GRIK2Q13002 908 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 ENPP2Q13822 863 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 COL9A2Q14055 689 aaPredicted RBP17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 FYB2Q5VWT5 728 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 NAXDQ8IW45 347 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 CADM4Q8NFZ8 388 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 UCMAQ8WVF2 138 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 ADAMTS14Q8WXS8 1223 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 TOE1Q96GM8 510 aaKnown RBP17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 CDK5RAP1Q96SZ6 601 aaKnown RBP17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 DUSP16Q9BY84 665 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 DCLK3Q9C098 648 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 DNAI2Q9GZS0 605 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 APOBEC3GQ9HC16 384 aaKnown RBP17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 LHX6Q9UPM6 363 aa17.72■□□□□ 0.43
UPF3AP3-201ENST00000420996 A0A1B0GTW7 788 aa17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 CILPO75339 1184 aa17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 ZSCAN22P10073 491 aaPredicted RBP17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 NCAM1P13591 858 aa17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 MFAP3P55082 362 aa17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 E2F5Q15329 346 aa17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 PROSER1Q86XN7 944 aa17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 GPR174Q9BXC1 333 aa17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 MKRN2Q9H000 416 aaKnown RBP17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 TRAF3IP3Q9Y228 551 aa17.71■□□□□ 0.43
UPF3AP3-201ENST00000420996 PKD1L2Q7Z442 2459 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 MEI4A8MW99 385 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 TAF4O00268 1085 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 CALUO43852 315 aaPredicted RBP17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 SYNCRIPO60506 623 aaKnown RBP17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 KIF20AO95235 890 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 F13A1P00488 732 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 FTH1P19P0C7X4 201 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 OXTRP30559 389 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 CORO1AP31146 461 aaKnown RBP17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 IL12RB1P42701 662 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 TPMTP51580 245 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 GEN1Q17RS7 908 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 PPP1R26Q5T8A7 1209 aaPredicted RBP17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 SIPA1Q96FS4 1042 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 PIWIL1Q96J94 861 aaKnown RBP17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 NIF3L1Q9GZT8 377 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms