RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 TMEM121BQ9BXQ6 578 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 UBXN6Q9BZV1 441 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 POLMQ9NP87 494 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 DNAJC17Q9NVM6 304 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 RAB20Q9NX57 234 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 CLIC5Q9NZA1 410 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 EVLQ9UI08 416 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 RAD54BQ9Y620 910 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 PCNX2A6NKB5 2137 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 ALDH1A2O94788 518 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 NDUFV2P19404 249 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 COBLL1Q53SF7 1204 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 TMEM215Q68D42 235 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 GRAMD4Q6IC98 578 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 SLC23A3Q6PIS1 610 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 CYP2U1Q7Z449 544 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 TMEM176AQ96HP8 235 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 FAXDC2Q96IV6 333 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 PIWIL1Q96J94 861 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 HEXIM2Q96MH2 286 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 GSDMAQ96QA5 445 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 ZSWIM1Q9BR11 485 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 LMBRD1Q9NUN5 540 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 CALCOCO1Q9P1Z2 691 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 WDR35Q9P2L0 1181 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 DNMT3LQ9UJW3 386 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 NAGPAQ9UK23 515 aa13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 AGO1Q9UL18 857 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-203ENST00000415281 DMXL2Q8TDJ6 3036 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 CKAP5Q14008 2032 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 MUC22E2RYF6 1773 aaPredicted RBP13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 TRIM49BA6NDI0 452 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 RNF225M0QZC1 329 aaPredicted RBP13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 KIF20AO95235 890 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 HOXB2P14652 356 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 MFAP3P55082 362 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 PKDCCQ504Y2 493 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 TRIM61Q5EBN2 209 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 SPDYCQ5MJ68 293 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 C10orf120Q5SQS8 335 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 SH3PXD2AQ5TCZ1 1133 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 LPCAT2Q7L5N7 544 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 PIP4P1Q86T03 277 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 SYT12Q8IV01 421 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 FAM217AQ8IXS0 508 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 ANKRD52Q8NB46 1076 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 FBXL13Q8NEE6 735 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 BHMTQ93088 406 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 MRGPRX1Q96LB2 322 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 NACA2Q9H009 215 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 CAPN10Q9HC96 672 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 TMEM9BQ9NQ34 198 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 CACNA2D2Q9NY47 1150 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 ANGPTL2Q9UKU9 493 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 SLC27A6Q9Y2P4 619 aa13.05□□□□□ -0.32
NCKIPSD-203ENST00000415281 KCNJ18B7U540 433 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 BIN1O00499 593 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 CLSTN1O94985 981 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 CALCAP01258 141 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 HMBSP08397 361 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 KRT13P13646 458 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 ENGP17813 658 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 SPINK2P20155 84 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 CSRP1P21291 193 aaKnown RBP13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 BMP6P22004 513 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 KCNA4P22459 653 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 DGKGP49619 791 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 PSEN1P49768 467 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 MXI1P50539 228 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 PDE4CQ08493 712 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 EFEMP1Q12805 493 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 ZNF658Q5TYW1 1059 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 PGBD3Q8N328 593 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 LMO3Q8TAP4 145 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 SLC35C1Q96A29 364 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 ZNF419Q96HQ0 510 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 MAN1B1Q9UKM7 699 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 STON1Q9Y6Q2 735 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 LAMA5O15230 3695 aa13.04□□□□□ -0.32
NCKIPSD-203ENST00000415281 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 MAP3K13O43283 966 aa13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 C7P10643 843 aa13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 IL12RB1P42701 662 aa13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 NOVA1P51513 510 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 TKTL1P51854 596 aa13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 YWHAGP61981 247 aaKnown RBP eCLIP13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 FAM193AP78312 1265 aa13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 SEMA3BQ13214 749 aa13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 TRIP4Q15650 581 aaPredicted RBP13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 ST3GAL2Q16842 350 aa13.03□□□□□ -0.32
NCKIPSD-203ENST00000415281 CHPFQ8IZ52 775 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms