RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SPATA31D4Q6ZUB0 917 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 GSDMBQ8TAX9 411 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 CXorf38Q8TB03 319 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 TWNKQ96RR1 684 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 MPHOSPH6Q99547 160 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 CDT1Q9H211 546 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 STN1Q9H668 368 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 SMYD2Q9NRG4 433 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 KLHL33A6NCF5 533 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 SOWAHBA6NEL2 793 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 SPECC1L-ADORA2AF8WAN1 911 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 MDM4O15151 490 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 GCATO75600 419 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 MAP3K6O95382 1288 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 BPGMP07738 259 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 SERPINA6P08185 405 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 MCF2P10911 925 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 RBL1P28749 1068 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 SNX16P57768 344 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 INCA1Q0VD86 236 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 TRMT5Q32P41 509 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 FAXCQ5TGI0 409 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 C1orf228Q6PIY5 440 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 IZUMO2Q6UXV1 221 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 LBX2Q6XYB7 198 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 KYAT3Q6YP21 454 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 ATG14Q6ZNE5 492 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 ZCCHC23Q6ZST2 131 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 RAPH1Q70E73 1250 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 CDKL3Q8IVW4 592 aaPredicted RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 MFN1Q8IWA4 741 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 SCUBE1Q8IWY4 988 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 MICALL2Q8IY33 904 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 PQLC3Q8N755 202 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 ACMSDQ8TDX5 336 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 MMP19Q99542 508 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 TTC1Q99614 292 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 GPR20Q99678 358 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 EBNA1BP2Q99848 306 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 EBF4Q9BQW3 602 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 ZNF670Q9BS34 389 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 CCDC106Q9BWC9 280 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 SMYD3Q9H7B4 428 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 GBA2Q9HCG7 927 aaPredicted RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 GPAMQ9HCL2 828 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 PRMT7Q9NVM4 692 aaPredicted RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 THAP1Q9NVV9 213 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 DDX43Q9NXZ2 648 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 SCOCQ9UIL1 159 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 BARX2Q9UMQ3 279 aaPredicted RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 MAGEA13PA6NCF6 341 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 LACTBL1A8MY62 500 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 RNASEH1O60930 286 aaKnown RBP10.13□□□□□ -0.79
CD44-206ENST00000415148 CIB2O75838 187 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 ITGB3P05106 788 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 CXCL8P10145 99 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 ETS2P15036 469 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 ANPEPP15144 967 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 ZFXP17010 805 aaPredicted RBP10.13□□□□□ -0.79
CD44-206ENST00000415148 NR2C2P49116 596 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 MBTD1Q05BQ5 628 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 STX3Q13277 289 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 CHI3L2Q15782 390 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 CCDC14Q49A88 953 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 SH3PXD2AQ5TCZ1 1133 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 EEF1DP3Q658K8 133 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 OR6B2Q6IFH4 312 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 APOBEC3FQ8IUX4 373 aaKnown RBP10.13□□□□□ -0.79
CD44-206ENST00000415148 ARID3BQ8IVW6 561 aaPredicted RBP10.13□□□□□ -0.79
CD44-206ENST00000415148 KLRG1Q96E93 195 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 SIGLEC10Q96LC7 697 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 NR1H4Q96RI1 486 aaPredicted RBP10.13□□□□□ -0.79
CD44-206ENST00000415148 ZNF184Q99676 751 aaPredicted RBP10.13□□□□□ -0.79
CD44-206ENST00000415148 THTPAQ9BU02 230 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 PCDH18Q9HCL0 1135 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 XAB2Q9HCS7 855 aaKnown RBP10.13□□□□□ -0.79
CD44-206ENST00000415148 PPARGC1AQ9UBK2 798 aaKnown RBP10.13□□□□□ -0.79
CD44-206ENST00000415148 SLC7A8Q9UHI5 535 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 PCDHA11Q9Y5I1 949 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 MGAMO43451 1857 aa10.13□□□□□ -0.79
CD44-206ENST00000415148 PRR5-ARHGAP8B1AHC4 643 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 INO80B-WBP1J3KQ70 363 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 BAG2O95816 211 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 LYNP07948 512 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 NFICP08651 508 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 SETSIPP0DME0 302 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 OSTNP61366 133 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 ARHGAP8P85298 464 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 RBBP5Q15291 538 aaKnown RBP10.12□□□□□ -0.79
CD44-206ENST00000415148 LRRC36Q1X8D7 754 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 TMEM132AQ24JP5 1023 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 JADE1Q6IE81 842 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 TRNP1Q6NT89 227 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 AAGABQ6PD74 315 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 MTHFD1LQ6UB35 978 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 UNC5AQ6ZN44 842 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 FAM183BPQ6ZVS7 135 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 NT5DC4Q86YG4 428 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 MYLK4Q86YV6 388 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms