RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 MAFO75444 373 aaPredicted RBP18.23■□□□□ 0.51
SDCBP-202ENST00000413219 KRT81Q14533 505 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 BOLA3Q53S33 107 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 TEDDM1Q5T9Z0 273 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 MROH9Q5TGP6 573 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 MBLAC2Q68D91 279 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 SLC9A4Q6AI14 798 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 CCDC33Q8N5R6 958 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 NLRP4Q96MN2 994 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 DNAJC28Q9NX36 388 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 DNAJC16Q9Y2G8 782 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 MEI4A8MW99 385 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 GSRP00390 522 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 HMGCRP04035 888 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 BCAR1P56945 870 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 SLC25A3Q00325 362 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 LAMB3Q13751 1172 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 RNF217Q8TC41 542 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 PRPF31Q8WWY3 499 aaKnown RBP18.22■□□□□ 0.51
SDCBP-202ENST00000413219 ZNF778Q96MU6 729 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 MIS12Q9H081 205 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 EPB41L1Q9H4G0 881 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 NDUFA13Q9P0J0 144 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 FER1L6Q2WGJ9 1857 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 ZNF487B1APH4 448 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 CASQ2O14958 399 aaPredicted RBP18.22■□□□□ 0.51
SDCBP-202ENST00000413219 PEX1O43933 1283 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 GLRA3O75311 464 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 PRKCBP05771 671 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 FGF3P11487 239 aaPredicted RBP18.22■□□□□ 0.51
SDCBP-202ENST00000413219 IL4RP24394 825 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 GPD2P43304 727 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 RAP1GAPP47736 663 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 HIRAP54198 1017 aaPredicted RBP18.22■□□□□ 0.51
SDCBP-202ENST00000413219 CCNIQ14094 377 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 CFAP157Q5JU67 520 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 FAXCQ5TGI0 409 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 TRMT10BQ6PF06 316 aaKnown RBP18.22■□□□□ 0.51
SDCBP-202ENST00000413219 ZCCHC23Q6ZST2 131 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 ARHGAP22Q7Z5H3 698 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 CDKL3Q8IVW4 592 aaPredicted RBP18.22■□□□□ 0.51
SDCBP-202ENST00000413219 PQLC3Q8N755 202 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 DEPDC1BQ8WUY9 529 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 RXFP2Q8WXD0 754 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 BTBD9Q96Q07 612 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 APOL6Q9BWW8 343 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 NRDE2Q9H7Z3 1164 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 MOCS1Q9NZB8 636 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 ZNF214Q9UL59 606 aaPredicted RBP18.22■□□□□ 0.51
SDCBP-202ENST00000413219 ADAMTS5Q9UNA0 930 aa18.22■□□□□ 0.51
SDCBP-202ENST00000413219 WNT10BO00744 389 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 AP1G1O43747 822 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 GCATO75600 419 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 TOMM70O94826 608 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 ALOX15P16050 662 aaPredicted RBP18.21■□□□□ 0.51
SDCBP-202ENST00000413219 PDGFRAP16234 1089 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 PROZP22891 400 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 SLC1A6P48664 564 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 LSAMPQ13449 338 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 SFT2D3Q587I9 215 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 IER5Q5VY09 327 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 ZNF534Q76KX8 674 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 ZBTB8OSQ8IWT0 167 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 DRAXINQ8NBI3 349 aaPredicted RBP18.21■□□□□ 0.51
SDCBP-202ENST00000413219 PYDC1Q8WXC3 89 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 CMTM5Q96DZ9 223 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 TMEM176AQ96HP8 235 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 TBCBQ99426 244 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 ACAD9Q9H845 621 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 SMIM31A0A1B0GVY4 71 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 M0QYV0 167 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 SIN3BO75182 1162 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 CILPO75339 1184 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 SERPINE1P05121 402 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 GRK2P25098 689 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 PRDX6P30041 224 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 MSLNQ13421 630 aaPredicted RBP18.21■□□□□ 0.51
SDCBP-202ENST00000413219 STXBP2Q15833 593 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 MEX3CQ5U5Q3 659 aaKnown RBP18.21■□□□□ 0.51
SDCBP-202ENST00000413219 STEAP4Q687X5 459 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 DPY19L2Q6NUT2 758 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 MPZL3Q6UWV2 235 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 RNF111Q6ZNA4 994 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 TEPSINQ96N21 525 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 ELOVL4Q9GZR5 314 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 CYP3A43Q9HB55 503 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 MAD1L1Q9Y6D9 718 aa18.21■□□□□ 0.51
SDCBP-202ENST00000413219 DPYSL4O14531 572 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 ALDH1A2O94788 518 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 IL18RAPO95256 599 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 VDRP11473 427 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 VCLP18206 1134 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 ERFP50548 548 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 SH3PXD2AQ5TCZ1 1133 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 TRNP1Q6NT89 227 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 SLC26A7Q8TE54 656 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 PPP4R1Q8TF05 950 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 GDPD5Q8WTR4 605 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 PCYT2Q99447 389 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 EPAS1Q99814 870 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms