RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 ADAM32Q8TC27 787 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 IRGQQ8WZA9 623 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 OTUB2Q96DC9 234 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 CPXM1Q96SM3 734 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 STK33Q9BYT3 514 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 PDCL3Q9H2J4 239 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 ZDHHC4Q9NPG8 344 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
SSB-203ENST00000413002 LRRC10BA6NIK2 292 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 K7EQS6 105 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 GRAP2O75791 330 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 FBXO21O94952 628 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 NCAM1P13591 858 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 DRD1P21728 446 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 ACADSBP45954 432 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 PXNP49023 591 aaPredicted RBP13.73□□□□□ -0.21
SSB-203ENST00000413002 IQCB1Q15051 598 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 C2orf27AQ580R0 203 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 EMC10Q5UCC4 262 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 SYPL2Q5VXT5 272 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 HEATR6Q6AI08 1181 aaKnown RBP13.73□□□□□ -0.21
SSB-203ENST00000413002 TMEM110Q86TL2 294 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 RPLP0P6Q8NHW5 317 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 STK32AQ8WU08 396 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 SLC20A1Q8WUM9 679 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 GOLGA1Q92805 767 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 PPP1R13BQ96KQ4 1090 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 PNKPQ96T60 521 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 BPIFA3Q9BQP9 254 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 BBS2Q9BXC9 721 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 IRF2BPLQ9H1B7 796 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 CBX8Q9HC52 389 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 PRMT8Q9NR22 394 aaPredicted RBP13.73□□□□□ -0.21
SSB-203ENST00000413002 ARHGEF4Q9NR80 690 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 OLA1Q9NTK5 396 aaKnown RBP13.73□□□□□ -0.21
SSB-203ENST00000413002 PCDHGC3Q9UN70 934 aa13.73□□□□□ -0.21
SSB-203ENST00000413002 WDR87Q6ZQQ6 2873 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 TSPAN3O60637 253 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 TULP3O75386 442 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 KAT7O95251 611 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 ERBB2P04626 1255 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 MMEP08473 750 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 TDGF1P13385 188 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 TYRP14679 529 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 MRE11P49959 708 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 CCR3P51677 355 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 BPIFB4P59827 614 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 PITX1P78337 314 aaPredicted RBP13.72□□□□□ -0.21
SSB-203ENST00000413002 TRIP4Q15650 581 aaPredicted RBP13.72□□□□□ -0.21
SSB-203ENST00000413002 MEA1Q16626 185 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 ZSCAN23Q3MJ62 389 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 C2CD6Q53TS8 623 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 OR6B2Q6IFH4 312 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 LUZP1Q86V48 1076 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 ETFBKMTQ8IXQ9 262 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 SYNPOQ8N3V7 929 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 CCDC33Q8N5R6 958 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 DQX1Q8TE96 717 aaKnown RBP13.72□□□□□ -0.21
SSB-203ENST00000413002 DDX1Q92499 740 aaKnown RBP13.72□□□□□ -0.21
SSB-203ENST00000413002 NAP1L5Q96NT1 182 aaPredicted RBP13.72□□□□□ -0.21
SSB-203ENST00000413002 LHX5Q9H2C1 402 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 DNAJC17Q9NVM6 304 aaKnown RBP13.72□□□□□ -0.21
SSB-203ENST00000413002 FBXO4Q9UKT5 387 aa13.72□□□□□ -0.21
SSB-203ENST00000413002 VPS13AQ96RL7 3174 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 GOLGA6L7A0A1B0GV03 622 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 CHURC1-FNTBB4DL54 471 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 K7ESF4 209 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 CAPN9O14815 690 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 HOXC11O43248 304 aaPredicted RBP13.71□□□□□ -0.21
SSB-203ENST00000413002 TIE1P35590 1138 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 SOX5P35711 763 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 NBL1P41271 181 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 FNTBP49356 437 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 JAM2P57087 298 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 ARID5AQ03989 594 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 PTPN20Q4JDL3 420 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 MSANTD2Q6P1R3 559 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 TOGARAM2Q6ZUX3 1019 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 FAM183BPQ6ZVS7 135 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 PHTF2Q8N3S3 785 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 EPS8L1Q8TE68 723 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 EXOC4Q96A65 974 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 PLD4Q96BZ4 506 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 ERLEC1Q96DZ1 483 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 SPAG5Q96R06 1193 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 DCLK3Q9C098 648 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 SYNCQ9H7C4 482 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 DEC1Q9P2X7 70 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 CLEC4EQ9ULY5 219 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 HBS1LQ9Y450 684 aaKnown RBP13.71□□□□□ -0.21
SSB-203ENST00000413002 MYOFQ9NZM1 2061 aa13.71□□□□□ -0.21
SSB-203ENST00000413002 ATG2BQ96BY7 2078 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 SYNJ2BP-COX16A0A087WUM0 186 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 APODP05090 189 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 CHRNB2P17787 502 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 GRIA2P42262 883 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 HARS2P49590 506 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms