RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 PCDHA13Q9Y5I0 950 aa0.97□□□□□ -2.25
RNU6-554P-201ENST00000410466 MEIOCA2RUB1 952 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 FAM172BPA6NC97 362 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 PRSS29PA6NIE9 313 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 FYB1O15117 783 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 KIF1CO43896 1103 aaKnown RBP0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 RFPL3O75679 317 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 OSMP13725 252 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 ST6GAL1P15907 406 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 CREB1P16220 341 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 ZNF12P17014 697 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 KCNA3P22001 575 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 NR0B1P51843 470 aaKnown RBP0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 TUBA1BP68363 451 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 GRIK2Q13002 908 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 PABPC4Q13310 644 aaKnown RBP eCLIP0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 GPR18Q14330 331 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 TCTE1Q5JU00 501 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 DNTTIP2Q5QJE6 756 aaKnown RBP0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 ZC2HC1BQ5TFG8 222 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 PLA2G4FQ68DD2 849 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 SLC4A10Q6U841 1118 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 FAM198BQ6UWH4 519 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 FJX1Q86VR8 437 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 NAGSQ8N159 534 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 ANKRD52Q8NB46 1076 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 ZNF248Q8NDW4 579 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 SPATA20Q8TB22 786 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 FAM222BQ8WU58 562 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 RUNDC1Q96C34 613 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 MRRFQ96E11 262 aaKnown RBP0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 CLPTM1LQ96KA5 538 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 IL17FQ96PD4 163 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 MOGAT1Q96PD6 335 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 C17orf80Q9BSJ5 609 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 KRTAP4-1Q9BYQ7 146 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 CXorf36Q9H7Y0 433 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 MGAT4CQ9UBM8 478 aa0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 NIPSNAP3AQ9UFN0 247 aaPredicted RBP0.96□□□□□ -2.26
RNU6-554P-201ENST00000410466 LCATP04180 440 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 LRPAP1P30533 357 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 MYO1EQ12965 1108 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 PCBP1Q15365 356 aaKnown RBP eCLIP0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 PLEKHO1Q53GL0 409 aaPredicted RBP0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 TDRD12Q587J7 1177 aaKnown RBP0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 FNBP1LQ5T0N5 605 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 TFAP2DQ7Z6R9 452 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 LRRTM3Q86VH5 581 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 SKAP1Q86WV1 359 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 EPHX4Q8IUS5 362 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 CADM3Q8N126 398 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 C12orf76Q8N812 135 aaPredicted RBP0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 ABCF1Q8NE71 845 aaKnown RBP eCLIP0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 NGDNQ8NEJ9 315 aaKnown RBP0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 LILRB1Q8NHL6 650 aaPredicted RBP0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 LMBR1Q8WVP7 490 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 HDAC10Q969S8 669 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 EDC3Q96F86 508 aaKnown RBP0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 LCE3DQ9BYE3 92 aa0.95□□□□□ -2.26
RNU6-554P-201ENST00000410466 GAGE12JA6NER3 117 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 NT5C1B-RDH14C9J2C7 533 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 ULK1O75385 1050 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 SRSF10O75494 262 aaKnown RBP0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 SLC22A3O75751 556 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 CYP2C9P11712 490 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 ARSBP15848 533 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 MALP21145 153 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 DGKAP23743 735 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 SMARCA1P28370 1054 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 MTNR1BP49286 362 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 HLCSP50747 726 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 DRG2P55039 364 aaKnown RBP0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 GRSF1Q12849 480 aaKnown RBP eCLIP0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 HDAC1Q13547 482 aaPredicted RBP0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 ST3GAL2Q16842 350 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 CNNM4Q6P4Q7 775 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 UEVLDQ8IX04 471 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 CMIPQ8IY22 773 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 PPM1KQ8N3J5 372 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 ZNF843Q8N446 348 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 FBXL16Q8N461 479 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 TCP11L2Q8N4U5 519 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 AMER3Q8N944 861 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 SLC43A3Q8NBI5 491 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 FAM216AQ8WUB2 273 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 CD101Q93033 1021 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 ADGRG7Q96K78 797 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 MRPL46Q9H2W6 279 aaKnown RBP0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 AGO4Q9HCK5 861 aaKnown RBP0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 ST6GALNAC1Q9NSC7 600 aaPredicted RBP0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 OCIAD1Q9NX40 245 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 PAK5Q9P286 719 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 IPO11Q9UI26 975 aaKnown RBP0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 CROCCQ5TZA2 2017 aa0.94□□□□□ -2.26
RNU6-554P-201ENST00000410466 SAA2-SAA4A0A096LPE2 208 aa0.93□□□□□ -2.26
RNU6-554P-201ENST00000410466 KLHL33A6NCF5 533 aa0.93□□□□□ -2.26
RNU6-554P-201ENST00000410466 KRTAP16-1A8MUX0 517 aa0.93□□□□□ -2.26
RNU6-554P-201ENST00000410466 P2RY10O00398 339 aa0.93□□□□□ -2.26
RNU6-554P-201ENST00000410466 PPP1R12AO14974 1030 aaPredicted RBP0.93□□□□□ -2.26
RNU6-554P-201ENST00000410466 CRYAAP02489 173 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms