RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 NANOGNBQ7Z5D8 188 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 IQCF2Q8IXL9 164 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 KLHL23Q8NBE8 558 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 OSMRQ99650 979 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 APOL2Q9BQE5 337 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.54□□□□□ -0.561e-6■■■□□ 14.6
PRPF40A-202ENST00000410080 RPS6KL1Q9Y6S9 549 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 PDHBP11177 359 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 UQCRBP14927 111 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM45AQ8TCE6 357 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 TAAR1Q96RJ0 339 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 ENTPD4Q9Y227 616 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 NR3C2P08235 984 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 ITPK1Q13572 414 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 CRYMQ14894 314 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 NDUFAF6Q330K2 333 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 POTEAQ6S8J7 498 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM124AQ86V42 546 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 EDEM1Q92611 657 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 MXRA8Q9BRK3 442 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 TRIM51Q9BSJ1 452 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 SEPT3Q9UH03 358 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 MTSS1O43312 755 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 TCEA1P23193 301 aaKnown RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 MAGEA10P43363 369 aaPredicted RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 CLK3P49761 638 aaKnown RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 FGD3Q5JSP0 725 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 RPTNQ6XPR3 784 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM20CQ8IXL6 584 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 SLC9A7Q96T83 725 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 GINS4Q9BRT9 223 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 POLE3Q9NRF9 147 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 AHSPQ9NZD4 102 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 ADAM30Q9UKF2 790 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 TRPC5OSA6NMA1 111 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 CLCN3P51790 818 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM45BPQ6NSW5 357 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 NLRP14Q86W24 1093 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 KLF6Q99612 283 aaPredicted RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 PRRG3Q9BZD7 231 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 SUCOQ9UBS9 1254 aaKnown RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 LYVE1Q9Y5Y7 322 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 H3BN98 237 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 SLC45A4Q5BKX6 768 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 ZNF280DQ6N043 979 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 ESRP1Q6NXG1 681 aaKnown RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 DENND1BQ6P3S1 775 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 FBXO38Q6PIJ6 1188 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 ZNF786Q8N393 782 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 MCOLN3Q8TDD5 553 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 ATG4CQ96DT6 458 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 KCNS3Q9BQ31 491 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 MTG1Q9BT17 334 aaPredicted RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 DPY30Q9C005 99 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 AP4E1Q9UPM8 1137 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 WDR19Q8NEZ3 1342 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM220BPB1ANY3 271 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 KLHL2O95198 593 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 ITGALP20701 1170 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 MTF1Q14872 753 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 TTC33Q6PID6 262 aaPredicted RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 HEATR4Q86WZ0 1026 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 PARP9Q8IXQ6 854 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 FEZF2Q8TBJ5 459 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 KLHL28Q9NXS3 571 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 VPS51Q9UID3 782 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 KIF1CO43896 1103 aaKnown RBP11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 ATP6V1B1P15313 513 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 CCT8P50990 548 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 SPIDRQ14159 915 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 GJB7Q6PEY0 223 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 GRID1Q9ULK0 1009 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 SH3GLB1Q9Y371 365 aa11.53□□□□□ -0.56
PRPF40A-202ENST00000410080 VPS4BO75351 444 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 CHN1P15882 459 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 POU6F1Q14863 301 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 SLC13A5Q86YT5 568 aaPredicted RBP11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 SUSD6Q92537 303 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 GRAMD1AQ96CP6 724 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 PPP1R10Q96QC0 940 aaKnown RBP11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 TBX20Q9UMR3 447 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 PABPC1P11940 636 aaKnown RBP11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 PAICSP22234 425 aaKnown RBP11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 GEMP55040 296 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 ORC2Q13416 577 aaPredicted RBP11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 GNA13Q14344 377 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 SERPINB12Q96P63 405 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.56
PRPF40A-202ENST00000410080 BIRC5O15392 142 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 C4BPBP20851 252 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 CPA2P48052 419 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 CYLC2Q14093 348 aaPredicted RBP11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 CCNIQ14094 377 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 CXorf40AQ8TE69 158 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 JSRP1Q96MG2 331 aaPredicted RBP11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 FICDQ9BVA6 458 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms