RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CEP76Q8TAP6 659 aa15.23■□□□□ 0.03
MCF2L-210ENST00000409954 TCEAL3Q969E4 200 aa15.23■□□□□ 0.03
MCF2L-210ENST00000409954 GABRG3Q99928 467 aa15.23■□□□□ 0.03
MCF2L-210ENST00000409954 NUSAP1Q9BXS6 441 aaKnown RBP15.23■□□□□ 0.03
MCF2L-210ENST00000409954 LRRC4Q9HBW1 653 aa15.23■□□□□ 0.03
MCF2L-210ENST00000409954 ZDHHC4Q9NPG8 344 aa15.23■□□□□ 0.03
MCF2L-210ENST00000409954 TMEM9BQ9NQ34 198 aa15.23■□□□□ 0.03
MCF2L-210ENST00000409954 OLA1Q9NTK5 396 aaKnown RBP15.23■□□□□ 0.03
MCF2L-210ENST00000409954 MARCH2Q9P0N8 246 aa15.23■□□□□ 0.03
MCF2L-210ENST00000409954 HCN2Q9UL51 889 aa15.23■□□□□ 0.03
MCF2L-210ENST00000409954 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 A0A1W2PQF6 199 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 PRRT4C9JH25 899 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 XPO1O14980 1071 aaKnown RBP15.22■□□□□ 0.03
MCF2L-210ENST00000409954 PENKP01210 267 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-210ENST00000409954 KLKB1P03952 638 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 GABRG2P18507 467 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 TKTL1P51854 596 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 YWHAGP61981 247 aaKnown RBP eCLIP15.22■□□□□ 0.03
MCF2L-210ENST00000409954 CETN1Q12798 172 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 TMEFF1Q8IYR6 380 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 CPXM2Q8N436 756 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 IPO4Q8TEX9 1081 aaKnown RBP15.22■□□□□ 0.03
MCF2L-210ENST00000409954 UCMAQ8WVF2 138 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 CEP63Q96MT8 703 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 SLC2A11Q9BYW1 496 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 MBD1Q9UIS9 605 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-210ENST00000409954 RASAL2Q9UJF2 1139 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 SPTBN2O15020 2390 aa15.22■□□□□ 0.03
MCF2L-210ENST00000409954 LNP1A1A4G5 178 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 KCNA4P22459 653 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 CORO1AP31146 461 aaKnown RBP15.21■□□□□ 0.03
MCF2L-210ENST00000409954 WASP42768 502 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 PMS1P54277 932 aaKnown RBP15.21■□□□□ 0.03
MCF2L-210ENST00000409954 BCAT1P54687 386 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 PDE4CQ08493 712 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 BST2Q10589 180 aaKnown RBP15.21■□□□□ 0.03
MCF2L-210ENST00000409954 LYSMD4Q5XG99 296 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 EGFLAMQ63HQ2 1017 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 SLC23A3Q6PIS1 610 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 FOXR2Q6PJQ5 311 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 TOGARAM2Q6ZUX3 1019 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 RABEPKQ7Z6M1 372 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 METTL3Q86U44 580 aaKnown RBP15.21■□□□□ 0.03
MCF2L-210ENST00000409954 SCML4Q8N228 414 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 FRMD1Q8N878 549 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 RNF139Q8WU17 664 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 KCTD13Q8WZ19 329 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 SLC35C1Q96A29 364 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 PLD4Q96BZ4 506 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 IPO9Q96P70 1041 aaKnown RBP15.21■□□□□ 0.03
MCF2L-210ENST00000409954 ACOX2Q99424 681 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 ARID3AQ99856 593 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 ABCC13Q9NSE7 274 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 PLK2Q9NYY3 685 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 TSPAN16Q9UKR8 245 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 ANGPTL2Q9UKU9 493 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 AGO1Q9UL18 857 aaKnown RBP15.21■□□□□ 0.03
MCF2L-210ENST00000409954 SPAG17Q6Q759 2223 aa15.21■□□□□ 0.03
MCF2L-210ENST00000409954 HELZP42694 1942 aaKnown RBP15.21■□□□□ 0.02
MCF2L-210ENST00000409954 SLC12A8A0AV02 714 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 CDX4O14627 284 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-210ENST00000409954 P4HA2O15460 535 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 PAEPP09466 180 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 SETSIPP0DME0 302 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 CEACAM1P13688 526 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 CD19P15391 556 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 CSRP1P21291 193 aaKnown RBP15.2■□□□□ 0.02
MCF2L-210ENST00000409954 PTGER3P43115 390 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 FMO5P49326 533 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 HARS2P49590 506 aaKnown RBP15.2■□□□□ 0.02
MCF2L-210ENST00000409954 ZNF445P59923 1031 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 RPL6Q02878 288 aaKnown RBP15.2■□□□□ 0.02
MCF2L-210ENST00000409954 STILQ15468 1287 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 TRIP4Q15650 581 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-210ENST00000409954 CNGA2Q16280 664 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 DUOXA1Q1HG43 343 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 TRIM61Q5EBN2 209 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 FYB2Q5VWT5 728 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 DENND1CQ8IV53 801 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 ULBP1Q9BZM6 244 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 CD248Q9HCU0 757 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 PILRBQ9UKJ0 227 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 SLC6A14Q9UN76 642 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 HBS1LQ9Y450 684 aaKnown RBP15.2■□□□□ 0.02
MCF2L-210ENST00000409954 ABCA7Q8IZY2 2146 aa15.2■□□□□ 0.02
MCF2L-210ENST00000409954 PATE3B3GLJ2 98 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 HMBSP08397 361 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 PMLP29590 882 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 MFAP3P55082 362 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 SHC2P98077 582 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 ZNF33AQ06730 810 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 LRMPQ12912 555 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 STARD3Q14849 445 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 EIF4HQ15056 248 aaKnown RBP15.19■□□□□ 0.02
MCF2L-210ENST00000409954 GOLGA7BQ2TAP0 167 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 MPPE1Q53F39 396 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 PEAR1Q5VY43 1037 aaPredicted RBP15.19■□□□□ 0.02
MCF2L-210ENST00000409954 BSPRYQ5W0U4 402 aa15.19■□□□□ 0.02
MCF2L-210ENST00000409954 LCLAT1Q6UWP7 414 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms