RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 MYO18AQ92614 2054 aaKnown RBP11.39□□□□□ -0.59
CHMP3-205ENST00000409810 OTOL1A6NHN0 477 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-205ENST00000409810 LRRC53A6NM62 1247 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 TRDMT1O14717 391 aaKnown RBP11.38□□□□□ -0.59
CHMP3-205ENST00000409810 LATS1O95835 1130 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 ERBB2P04626 1255 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 DCNP07585 359 aaKnown RBP11.38□□□□□ -0.59
CHMP3-205ENST00000409810 COL9A1P20849 921 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 DRD1P21728 446 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 SCNN1AP37088 669 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 EIF2DP41214 584 aaKnown RBP11.38□□□□□ -0.59
CHMP3-205ENST00000409810 GABRB2P47870 512 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 YWHAZP63104 245 aaKnown RBP11.38□□□□□ -0.59
CHMP3-205ENST00000409810 NOMO3P69849 1222 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 FMO1Q01740 532 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 SLC6A3Q01959 620 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 TRIP4Q15650 581 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-205ENST00000409810 ASIC2Q16515 512 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 ANO4Q32M45 955 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 SFMBT2Q5VUG0 894 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 NAA35Q5VZE5 725 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 NUGGCQ68CJ6 796 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 PPP1R2P3Q6NXS1 205 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 Q6ZNB5 142 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 FAM183BPQ6ZVS7 135 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 SLC26A9Q7LBE3 791 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 UNC45BQ8IWX7 931 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 SYNPOQ8N3V7 929 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 DTWD2Q8NBA8 298 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 RNF214Q8ND24 703 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 CCDC26Q8TAB7 109 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 SLC20A1Q8WUM9 679 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 BAP1Q92560 729 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 CLDN23Q96B33 292 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 P2RY13Q9BPV8 354 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 IRF2BPLQ9H1B7 796 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 NUCKS1Q9H1E3 243 aaKnown RBP11.38□□□□□ -0.59
CHMP3-205ENST00000409810 SPHK2Q9NRA0 654 aa11.38□□□□□ -0.59
CHMP3-205ENST00000409810 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.38□□□□□ -0.595e-7■□□□□ 8.3
CHMP3-205ENST00000409810 ITIH6Q6UXX5 1313 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 A0A1W2PQJ5 194 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 SHISA7A6NL88 538 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 HOXC11O43248 304 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-205ENST00000409810 MSI1O43347 362 aaKnown RBP11.37□□□□□ -0.59
CHMP3-205ENST00000409810 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-205ENST00000409810 PI15O43692 258 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 DAB1O75553 588 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 CYP1A1P04798 512 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-205ENST00000409810 CYBBP04839 570 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 GBP1P32455 592 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 NSFP46459 744 aaKnown RBP11.37□□□□□ -0.59
CHMP3-205ENST00000409810 TBX4P57082 545 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 CDK17Q00537 523 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 RING1Q06587 406 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 MTA1Q13330 715 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 FBXO43Q4G163 708 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 TMEM196Q5HYL7 178 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 LY6G5CQ5SRR4 150 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 TXNDC11Q6PKC3 985 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 OLFML1Q6UWY5 402 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 NUDT18Q6ZVK8 323 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 DENND1CQ8IV53 801 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 CPXM2Q8N436 756 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 DQX1Q8TE96 717 aaKnown RBP11.37□□□□□ -0.59
CHMP3-205ENST00000409810 CPA5Q8WXQ8 436 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 WBP2Q969T9 261 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 XPO6Q96QU8 1125 aaKnown RBP11.37□□□□□ -0.59
CHMP3-205ENST00000409810 AGPAT1Q99943 283 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 DDX50Q9BQ39 737 aaKnown RBP11.37□□□□□ -0.59
CHMP3-205ENST00000409810 TTYH3Q9C0H2 523 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 CHRDQ9H2X0 955 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 FAM204AQ9H8W3 233 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 LMAN1LQ9HAT1 526 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 TMEM51Q9NW97 253 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 RRN3Q9NYV6 651 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 WDR35Q9P2L0 1181 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 TJP2Q9UDY2 1190 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 STAP1Q9ULZ2 295 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 NAALADL1Q9UQQ1 740 aa11.37□□□□□ -0.59
CHMP3-205ENST00000409810 MTF2Q9Y483 593 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-205ENST00000409810 IRAK2O43187 625 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 GREM1O60565 184 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 TRUB2O95900 331 aaKnown RBP11.36□□□□□ -0.59
CHMP3-205ENST00000409810 APOEP02649 317 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 APODP05090 189 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 CALB1P05937 261 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 FYNP06241 537 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 TPM1P09493 284 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 SLC2A3P11169 496 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 CHRNB1P11230 501 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 CHRNB2P17787 502 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 NOS2P35228 1153 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 PBX1P40424 430 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 SLC11A2P49281 568 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 GALK1P51570 392 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 PTPN5P54829 565 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 CENPCQ03188 943 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 CCINQ13939 588 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 TRIM14Q14142 442 aa11.36□□□□□ -0.59
CHMP3-205ENST00000409810 PPP2R5DQ14738 602 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms