RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 NFATC1O95644 943 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 IGLV3-27P01718 113 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 HMBSP08397 361 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 SCNN1AP37088 669 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 PITX1P78337 314 aaPredicted RBP23.35■■□□□ 1.33
PTCD3-203ENST00000409783 HGSNATQ68CP4 663 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 RHBDF2Q6PJF5 856 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 TOGARAM2Q6ZUX3 1019 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 ZNF571Q7Z3V5 609 aaPredicted RBP23.35■■□□□ 1.33
PTCD3-203ENST00000409783 CPA6Q8N4T0 437 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 FLCNQ8NFG4 579 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 CPLX3Q8WVH0 158 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 SYN2Q92777 582 aaPredicted RBP23.35■■□□□ 1.33
PTCD3-203ENST00000409783 MSANTD3Q96H12 275 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 TRIM62Q9BVG3 475 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 HAUS4Q9H6D7 363 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 SYNCQ9H7C4 482 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 LTB4R2Q9NPC1 389 aa23.35■■□□□ 1.33
PTCD3-203ENST00000409783 MTF2Q9Y483 593 aaPredicted RBP23.35■■□□□ 1.33
PTCD3-203ENST00000409783 MAN2B1O00754 1011 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 HSF2BPO75031 334 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 GRAP2O75791 330 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 IGLV3-25P01717 112 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 AOC1P19801 751 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 CASP14P31944 242 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 GJA4P35212 333 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 CLCN5P51795 746 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 VCPP55072 806 aaKnown RBP23.34■■□□□ 1.33
PTCD3-203ENST00000409783 FZD5Q13467 585 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 EIF4EBP2Q13542 120 aaPredicted RBP23.34■■□□□ 1.33
PTCD3-203ENST00000409783 DHCR24Q15392 516 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 SPECC1LQ69YQ0 1117 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 ASTLQ6HA08 431 aaPredicted RBP23.34■■□□□ 1.33
PTCD3-203ENST00000409783 ZNF852Q6ZMS4 543 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 MMS22LQ6ZRQ5 1243 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 PHF13Q86YI8 300 aaPredicted RBP23.34■■□□□ 1.33
PTCD3-203ENST00000409783 DEFB106AQ8N104 65 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 PLD4Q96BZ4 506 aa23.34■■□□□ 1.33
PTCD3-203ENST00000409783 NUCKS1Q9H1E3 243 aaKnown RBP23.34■■□□□ 1.33
PTCD3-203ENST00000409783 LSM7Q9UK45 103 aaKnown RBP23.34■■□□□ 1.33
PTCD3-203ENST00000409783 LUC7L2Q9Y383 392 aaKnown RBP23.34■■□□□ 1.33
PTCD3-203ENST00000409783 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.34■■□□□ 1.333e-10■□□□□ 8.4
PTCD3-203ENST00000409783 DAB1O75553 588 aa23.33■■□□□ 1.33
PTCD3-203ENST00000409783 SKILP12757 684 aa23.33■■□□□ 1.33
PTCD3-203ENST00000409783 TARSP26639 723 aaKnown RBP23.33■■□□□ 1.33
PTCD3-203ENST00000409783 CORO1AP31146 461 aaKnown RBP23.33■■□□□ 1.33
PTCD3-203ENST00000409783 TAC4Q86UU9 113 aa23.33■■□□□ 1.33
PTCD3-203ENST00000409783 TMEM105Q8N8V8 129 aa23.33■■□□□ 1.33
PTCD3-203ENST00000409783 PJA1Q8NG27 643 aa23.33■■□□□ 1.33
PTCD3-203ENST00000409783 FAM3CQ92520 227 aa23.33■■□□□ 1.33
PTCD3-203ENST00000409783 OSBPL6Q9BZF3 934 aa23.33■■□□□ 1.33
PTCD3-203ENST00000409783 DCLK3Q9C098 648 aa23.33■■□□□ 1.33
PTCD3-203ENST00000409783 AGO1Q9UL18 857 aaKnown RBP23.33■■□□□ 1.33
PTCD3-203ENST00000409783 CAPN9O14815 690 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 RING1Q06587 406 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 KLHL30Q0D2K2 578 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 NNTQ13423 1086 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 DCAF6Q58WW2 860 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 LY6G5CQ5SRR4 150 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 NAIF1Q69YI7 327 aaPredicted RBP23.32■■□□□ 1.32
PTCD3-203ENST00000409783 MON1BQ7L1V2 547 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 CCDC105Q8IYK2 499 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 MSANTD4Q8NCY6 345 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 ADAM32Q8TC27 787 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 P2RY11Q96G91 374 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 SLC39A13Q96H72 371 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 C11orf70Q9BRQ4 267 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 DLGAP2Q9P1A6 1054 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 TMEM59LQ9UK28 342 aa23.32■■□□□ 1.32
PTCD3-203ENST00000409783 DDX3XO00571 662 aaKnown RBP eCLIP23.31■■□□□ 1.326e-15■■■■□ 25.2
PTCD3-203ENST00000409783 TRUB2O95900 331 aaKnown RBP23.31■■□□□ 1.32
PTCD3-203ENST00000409783 TNFAIP3P21580 790 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 AVPR2P30518 371 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 NSFP46459 744 aaKnown RBP23.31■■□□□ 1.32
PTCD3-203ENST00000409783 GSCP56915 257 aaPredicted RBP23.31■■□□□ 1.32
PTCD3-203ENST00000409783 TBX4P57082 545 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 NR1H3Q13133 447 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 ARID5BQ14865 1188 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 FAM102AQ5T9C2 384 aaPredicted RBP23.31■■□□□ 1.32
PTCD3-203ENST00000409783 OTUD1Q5VV17 481 aaPredicted RBP23.31■■□□□ 1.32
PTCD3-203ENST00000409783 TRNP1Q6NT89 227 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 C1orf228Q6PIY5 440 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 TMEM25Q86YD3 366 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 DENND1CQ8IV53 801 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 FAM217AQ8IXS0 508 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 FCRL2Q96LA5 508 aaPredicted RBP23.31■■□□□ 1.32
PTCD3-203ENST00000409783 SERPINB11Q96P15 392 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 NELL2Q99435 816 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 ADAM33Q9BZ11 813 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 TRIM5Q9C035 493 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 SPHK2Q9NRA0 654 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 SEPT11Q9NVA2 429 aaKnown RBP23.31■■□□□ 1.32
PTCD3-203ENST00000409783 TAS2R14Q9NYV8 317 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 STOML2Q9UJZ1 356 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 ZNF510Q9Y2H8 683 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 KIAA1549LQ6ZVL6 1849 aa23.31■■□□□ 1.32
PTCD3-203ENST00000409783 FAM170BA6NMN3 283 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 GOLGA8SH3BPF8 625 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 STK25O00506 426 aa23.3■■□□□ 1.32
PTCD3-203ENST00000409783 TRDMT1O14717 391 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms