RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CNTN6Q9UQ52 1028 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 CTNND2Q9UQB3 1225 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 PCDHB4Q9Y5E5 795 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 CYBBP04839 570 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 ZNF806P0C7X5 589 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 PXNP49023 591 aaPredicted RBP15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 SEC13P55735 322 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 EFEMP1Q12805 493 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 LRMPQ12912 555 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 SRSF5Q13243 272 aaKnown RBP15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 LPAL2Q16609 132 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 RSPO4Q2I0M5 234 aaPredicted RBP15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 PKDCCQ504Y2 493 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 CT47A1Q5JQC4 288 aaPredicted RBP15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 DGLUCYQ7Z3D6 616 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 MIB1Q86YT6 1006 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 CPXM2Q8N436 756 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 NAT16Q8N8M0 369 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 TXNDC5Q8NBS9 432 aaKnown RBP15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 NETO1Q8TDF5 533 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 SLC2A11Q9BYW1 496 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 SLC27A6Q9Y2P4 619 aa15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 HBS1LQ9Y450 684 aaKnown RBP15.23■□□□□ 0.03
NIF3L1-205ENST00000409588 NEDD8-MDP1E9PL57 170 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 GFRA2O00451 464 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 SCAMP3O14828 347 aaKnown RBP15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 MED7O43513 233 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 TIMM44O43615 452 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 FBXO21O94952 628 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 EPN2O95208 641 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 KLF8O95600 359 aaPredicted RBP15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 LATS1O95835 1130 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 NTSR1P30989 418 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 DPP6P42658 865 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 HARS2P49590 506 aaKnown RBP15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 DGKGP49619 791 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 PLK5Q496M5 336 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 BSPRYQ5W0U4 402 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 KBTBD6Q86V97 674 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 C12orf40Q86WS4 652 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 CCDC33Q8N5R6 958 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 ALLCQ8N6M5 410 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 ZNF513Q8N8E2 541 aaPredicted RBP15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 STK32AQ8WU08 396 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 DDX1Q92499 740 aaKnown RBP15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 GOLGA1Q92805 767 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 TRIM62Q9BVG3 475 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 ULBP1Q9BZM6 244 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 DNAJC17Q9NVM6 304 aaKnown RBP15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 CDV3Q9UKY7 258 aaKnown RBP15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 DMXL1Q9Y485 3027 aa15.22■□□□□ 0.03
NIF3L1-205ENST00000409588 GTPBP10A4D1E9 387 aaKnown RBP15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 SART1O43290 800 aaKnown RBP15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 PENKP01210 267 aaPredicted RBP15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 HNRNPLP14866 589 aaKnown RBP eCLIP15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 ACADSBP45954 432 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 MFAP3P55082 362 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 STX17P56962 302 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 TRIP4Q15650 581 aaPredicted RBP15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 CAMK4Q16566 473 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 C10orf76Q5T2E6 689 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 PRR23CQ6ZRP0 262 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 CLEC17AQ6ZS10 378 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 TPGS1Q6ZTW0 290 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 OLIG1Q8TAK6 271 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 UBA3Q8TBC4 463 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 WBP2Q969T9 261 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 DUSP15Q9H1R2 295 aaPredicted RBP15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 PARD6AQ9NPB6 346 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 VPS45Q9NRW7 570 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 DACH1Q9UI36 760 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 RASAL2Q9UJF2 1139 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 NUDT5Q9UKK9 219 aa15.21■□□□□ 0.03
NIF3L1-205ENST00000409588 SLC12A8A0AV02 714 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 SGK1O00141 431 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 KLKB1P03952 638 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 CISD3P0C7P0 127 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 CORO1AP31146 461 aaKnown RBP15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 ANP32AP39687 249 aaKnown RBP15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 LIMK1P53667 647 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 KDSRQ06136 332 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 ADIGQ0VDE8 80 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 MPPE1Q53F39 396 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 PLA2G2CQ5R387 149 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 EMC10Q5UCC4 262 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 ANO7Q6IWH7 933 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 BEND5Q7L4P6 421 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 RRAGAQ7L523 313 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 FAM114A1Q8IWE2 563 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 UNC45BQ8IWX7 931 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 FAM217AQ8IXS0 508 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 ZNF557Q8N988 423 aaPredicted RBP15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 RBBP8NLQ8NC74 664 aaPredicted RBP15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 UCMAQ8WVF2 138 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 TFAP2BQ92481 460 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 AZIN2Q96A70 460 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 SPACA7Q96KW9 195 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 ARRDC1-AS1Q9H2J1 176 aa15.2■□□□□ 0.02
NIF3L1-205ENST00000409588 UBE2TQ9NPD8 197 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms