RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 MFAP3P55082 362 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 MAP3K7CLP57077 242 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 CYP24A1Q07973 514 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 PSMD6Q15008 389 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 PTPRNQ16849 979 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 STXBP4Q6ZWJ1 553 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 ACOT1Q86TX2 421 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 CCDC65Q8IXS2 484 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 ENGASEQ8NFI3 743 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 UCMAQ8WVF2 138 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 ZNF516Q92618 1163 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 SYAP1Q96A49 352 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-203ENST00000409225 ELMO3Q96BJ8 720 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 TNIP3Q96KP6 325 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 XYLT2Q9H1B5 865 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 FBXO44Q9H4M3 255 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 C6orf106Q9H6K1 298 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-203ENST00000409225 FBXO2Q9UK22 296 aaPredicted RBP17.58■□□□□ 0.4
CHMP3-203ENST00000409225 ANKRD6Q9Y2G4 727 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 CLIC4Q9Y696 253 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 KNL1Q8NG31 2342 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 E9PAM4 449 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 NPC1O15118 1278 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 CYP26A1O43174 497 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 PHACTR2O75167 634 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 STAU1O95793 577 aaKnown RBP17.57■□□□□ 0.4
CHMP3-203ENST00000409225 IGLV3-19P01714 112 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 ACO1P21399 889 aaKnown RBP17.57■□□□□ 0.4
CHMP3-203ENST00000409225 ATICP31939 592 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 HOXD13P35453 343 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 CYP2J2P51589 502 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 ZNF132P52740 706 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 CLDN6P56747 220 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 IL9RQ01113 521 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 ORC1Q13415 861 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 ENPP2Q13822 863 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 ZNF234Q14588 700 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 TEAD4Q15561 434 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 LARP1BQ659C4 914 aaKnown RBP17.57■□□□□ 0.4
CHMP3-203ENST00000409225 LAYNQ6UX15 382 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 Q6ZNB5 142 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 JAKMIP2Q96AA8 810 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 TMX3Q96JJ7 454 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 PRORYQ9H606 182 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 CYLDQ9NQC7 956 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 SMC3Q9UQE7 1217 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 SLC27A6Q9Y2P4 619 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 RAI2Q9Y5P3 530 aa17.57■□□□□ 0.4
CHMP3-203ENST00000409225 TMEM131Q92545 1883 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 CABIN1Q9Y6J0 2220 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 CLIC2O15247 247 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 EPHX1P07099 455 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 RARGP13631 454 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 PRKCHP24723 683 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 CCT8P50990 548 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 ZNF699Q32M78 642 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 C10orf120Q5SQS8 335 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 FYB2Q5VWT5 728 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 LRRC69Q6ZNQ3 347 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 CCDC73Q6ZRK6 1079 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 GPRIN1Q7Z2K8 1008 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 ZNF605Q86T29 641 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 SLC2A14Q8TDB8 520 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 NXPE2Q96DL1 559 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 SDCBP2Q9H190 292 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 NMUR1Q9HB89 426 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 TM9SF3Q9HD45 589 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 AGPAT3Q9NRZ7 376 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 FTSJ1Q9UET6 329 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 DNMT3LQ9UJW3 386 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 SRPRBQ9Y5M8 271 aaKnown RBP17.56■□□□□ 0.4
CHMP3-203ENST00000409225 KALRNO60229 2985 aa17.56■□□□□ 0.4
CHMP3-203ENST00000409225 A0A087X0B3 334 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 A0A1W2PQH9 124 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 H0Y8X5 98 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 TLX3O43711 291 aaPredicted RBP17.55■□□□□ 0.4
CHMP3-203ENST00000409225 STC2O76061 302 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 PENKP01210 267 aaPredicted RBP17.55■□□□□ 0.4
CHMP3-203ENST00000409225 EIF2S3P41091 472 aaKnown RBP17.55■□□□□ 0.4
CHMP3-203ENST00000409225 PLA2G4AP47712 749 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 SEMG2Q02383 582 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 ANKS1BQ7Z6G8 1248 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 TMPRSS12Q86WS5 348 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 SORCS1Q8WY21 1168 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 IGSF8Q969P0 613 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 FCRL3Q96P31 734 aaPredicted RBP17.55■□□□□ 0.4
CHMP3-203ENST00000409225 CIPCQ9C0C6 399 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 GZF1Q9H116 711 aaPredicted RBP17.55■□□□□ 0.4
CHMP3-203ENST00000409225 PCED1AQ9H1Q7 454 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 FAM49BQ9NUQ9 324 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 ELOVL2Q9NXB9 296 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 SCML2Q9UQR0 700 aa17.55■□□□□ 0.4
CHMP3-203ENST00000409225 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.55■□□□□ 0.4
CHMP3-203ENST00000409225 MUC22E2RYF6 1773 aaPredicted RBP17.54■□□□□ 0.4
CHMP3-203ENST00000409225 PCDHGA12O60330 932 aa17.54■□□□□ 0.4
CHMP3-203ENST00000409225 JUPP14923 745 aa17.54■□□□□ 0.4
CHMP3-203ENST00000409225 ADORA2BP29275 332 aa17.54■□□□□ 0.4
CHMP3-203ENST00000409225 ACSL1P33121 698 aa17.54■□□□□ 0.4
CHMP3-203ENST00000409225 GRIA4P48058 902 aa17.54■□□□□ 0.4
CHMP3-203ENST00000409225 BIRC3Q13489 604 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms