RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SHOX2O60902 331 aaPredicted RBP19.68■□□□□ 0.74
USP39-202ENST00000409025 TADA2AO75478 443 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 GOT1P17174 413 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 HPDP32754 393 aaPredicted RBP19.68■□□□□ 0.74
USP39-202ENST00000409025 AIF1P55008 147 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 EFHC2Q5JST6 749 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 PM20D1Q6GTS8 502 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 CENPUQ71F23 418 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 B4GALNT4Q76KP1 1039 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 CDKL3Q8IVW4 592 aaPredicted RBP19.68■□□□□ 0.74
USP39-202ENST00000409025 PYROXD2Q8N2H3 581 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 CPT1BQ92523 772 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 TLCD1Q96CP7 247 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 PIGVQ9NUD9 493 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 OGDHLQ9ULD0 1010 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 LRFN2Q9ULH4 789 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 HTTP42858 3142 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.67■□□□□ 0.74
USP39-202ENST00000409025 H3BRJ5 948 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 KCNN4O15554 427 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 PQBP1O60828 265 aaKnown RBP19.67■□□□□ 0.74
USP39-202ENST00000409025 OAZ2O95190 189 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 MAGOHP61326 146 aaKnown RBP19.67■□□□□ 0.74
USP39-202ENST00000409025 XRCC4Q13426 336 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 MTFR1Q15390 333 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 BHLHA9Q7RTU4 235 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 DCP1BQ8IZD4 617 aaKnown RBP19.67■□□□□ 0.74
USP39-202ENST00000409025 NAT8LQ8N9F0 302 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 EPS8L3Q8TE67 593 aaKnown RBP19.67■□□□□ 0.74
USP39-202ENST00000409025 PGAP3Q96FM1 320 aaPredicted RBP19.67■□□□□ 0.74
USP39-202ENST00000409025 C9orf72Q96LT7 481 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 TTC25Q96NG3 672 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 STMN4Q9H169 189 aaPredicted RBP19.67■□□□□ 0.74
USP39-202ENST00000409025 USP29Q9HBJ7 922 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 USP3Q9Y6I4 520 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 NLRC5Q86WI3 1866 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 PTPRDP23468 1912 aa19.67■□□□□ 0.74
USP39-202ENST00000409025 F9P00740 461 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 AMPD1P23109 780 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 CTU1Q7Z7A3 348 aaKnown RBP19.66■□□□□ 0.74
USP39-202ENST00000409025 NTAN1Q96AB6 310 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 RTP4Q96DX8 246 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 BEGAINQ9BUH8 593 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 TRIM62Q9BVG3 475 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 RNF208Q9H0X6 261 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 PAK5Q9P286 719 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 CCL5P13501 91 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 RBL1P28749 1068 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 GRIK1P39086 918 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 ARL4CP56559 192 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 PPP2R2AP63151 447 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 GNGT1P63211 74 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 BASP1P80723 227 aaKnown RBP19.66■□□□□ 0.74
USP39-202ENST00000409025 GBE1Q04446 702 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 HIF1AQ16665 826 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 NCBP2-AS2Q69YL0 99 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 LEKR1Q6ZMV7 388 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 BZW1Q7L1Q6 419 aaKnown RBP19.66■□□□□ 0.74
USP39-202ENST00000409025 ADAM32Q8TC27 787 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 RNF139Q8WU17 664 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 CCDC77Q9BR77 488 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 PHACTR1Q9C0D0 580 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 ZCWPW1Q9H0M4 648 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 DDIT4Q9NX09 232 aa19.66■□□□□ 0.74
USP39-202ENST00000409025 SYN3O14994 580 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 MAP3K6O95382 1288 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 AGTP01019 485 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 ABHD2P08910 425 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 ADRA1BP35368 520 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 SLCO1A2P46721 670 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 ARL13BQ3SXY8 428 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 SLC39A12Q504Y0 691 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 ANKRD22Q5VYY1 191 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 BSPRYQ5W0U4 402 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 TAB3Q8N5C8 712 aaPredicted RBP19.65■□□□□ 0.74
USP39-202ENST00000409025 EDEM1Q92611 657 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 SERPINB12Q96P63 405 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 CASD1Q96PB1 797 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 WDR6Q9NNW5 1121 aaKnown RBP19.65■□□□□ 0.74
USP39-202ENST00000409025 TMPRSS4Q9NRS4 437 aa19.65■□□□□ 0.74
USP39-202ENST00000409025 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.65■□□□□ 0.74
USP39-202ENST00000409025 GOLGA8MH3BSY2 632 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 ALOX15BO15296 676 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 HOXA2O43364 376 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 IVLP07476 585 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 OR4Q2P0C623 313 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 NRLP54845 237 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 SCAPQ12770 1279 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 SLC10A2Q12908 348 aaPredicted RBP19.64■□□□□ 0.74
USP39-202ENST00000409025 PDIA2Q13087 525 aaKnown RBP19.64■□□□□ 0.74
USP39-202ENST00000409025 AUHQ13825 339 aaKnown RBP19.64■□□□□ 0.74
USP39-202ENST00000409025 LONRF1Q17RB8 773 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 SLC45A4Q5BKX6 768 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 MFSD5Q6N075 450 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 COLEC11Q9BWP8 271 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 ARHGEF4Q9NR80 690 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 XPO7Q9UIA9 1087 aaKnown RBP19.64■□□□□ 0.74
USP39-202ENST00000409025 FBXW11Q9UKB1 542 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 ADAM28Q9UKQ2 775 aa19.64■□□□□ 0.74
USP39-202ENST00000409025 PATJQ8NI35 1801 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms