RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 TGM2P21980 687 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 CCND1P24385 295 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 TAF6P49848 677 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 DEUP1Q05D60 604 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
PCNX4-204ENST00000406949 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
PCNX4-204ENST00000406949 RELL1Q8IUW5 271 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 TBC1D10AQ9BXI6 508 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 PPP1R12CQ9BZL4 782 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 SIK2Q9H0K1 926 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 SLC5A4Q9NY91 659 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 CYB561D2O14569 222 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 CIB2O75838 187 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 PTPN7P35236 360 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 ABCG1P45844 678 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 MAP3K7CLP57077 242 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 BEX3Q00994 111 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 ACVR2BQ13705 512 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 ZRSR2Q15696 482 aaKnown RBP12.31□□□□□ -0.44
PCNX4-204ENST00000406949 CCDC142Q17RM4 750 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 TRMT10BQ6PF06 316 aaKnown RBP12.31□□□□□ -0.44
PCNX4-204ENST00000406949 COLGALT1Q8NBJ5 622 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 PPP4R1Q8TF05 950 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 FAM161BQ96MY7 647 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 TSNARE1Q96NA8 513 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 ZMAT2Q96NC0 199 aaKnown RBP12.31□□□□□ -0.44
PCNX4-204ENST00000406949 CDHR5Q9HBB8 845 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 CPA4Q9UI42 421 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 STAP1Q9ULZ2 295 aa12.31□□□□□ -0.44
PCNX4-204ENST00000406949 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.3□□□□□ -0.44
PCNX4-204ENST00000406949 CXorf49A8MYA2 514 aaPredicted RBP12.3□□□□□ -0.44
PCNX4-204ENST00000406949 H3BRJ5 948 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 CHADO15335 359 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 APOEP02649 317 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 PDHA1P08559 390 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 TYK2P29597 1187 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 SWT1Q5T5J6 900 aaKnown RBP12.3□□□□□ -0.44
PCNX4-204ENST00000406949 ZNF618Q5T7W0 954 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 RASSF3Q86WH2 238 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 TRIM42Q8IWZ5 723 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 CCDC185Q8N715 623 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 PTPRN2Q92932 1015 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 CXorf56Q9H5V9 222 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 SLC17A6Q9P2U8 582 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 INPP5FQ9Y2H2 1132 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 MFHAS1Q9Y4C4 1052 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
PCNX4-204ENST00000406949 RBBP6Q7Z6E9 1792 aaKnown RBP12.3□□□□□ -0.44
PCNX4-204ENST00000406949 SMPD1P17405 629 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 GRM5P41594 1212 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 TRNP1Q6NT89 227 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 KDELC2Q7Z4H8 507 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 USP33Q8TEY7 942 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 SLC44A1Q8WWI5 657 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 FGD4Q96M96 766 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 SPON1Q9HCB6 807 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 TMPRSS4Q9NRS4 437 aa12.3□□□□□ -0.44
PCNX4-204ENST00000406949 EEF2KO00418 725 aaKnown RBP12.29□□□□□ -0.44
PCNX4-204ENST00000406949 ENTPD5O75356 428 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 METTL18O95568 372 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 CD4P01730 458 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 NCF2P19878 526 aaPredicted RBP12.29□□□□□ -0.44
PCNX4-204ENST00000406949 MGAT1P26572 445 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 RPL10AP62906 217 aaKnown RBP12.29□□□□□ -0.44
PCNX4-204ENST00000406949 STX3Q13277 289 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 TSNAXIP1Q2TAA8 658 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 RAPH1Q70E73 1250 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 ARMCX6Q7L4S7 300 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 PIGZQ86VD9 579 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 UNC5BQ8IZJ1 945 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 MPP5Q8N3R9 675 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 HIPK4Q8NE63 616 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 HTR3CQ8WXA8 447 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 PPP1R36Q96LQ0 422 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 GBA2Q9HCG7 927 aaPredicted RBP12.29□□□□□ -0.44
PCNX4-204ENST00000406949 UBP1Q9NZI7 540 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 MCM3APO60318 1980 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 RNF103O00237 685 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 TYROBPO43914 113 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 TOP3BO95985 862 aaKnown RBP12.29□□□□□ -0.44
PCNX4-204ENST00000406949 HDAC4P56524 1084 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 SLC45A4Q5BKX6 768 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 BZW1Q7L1Q6 419 aaKnown RBP12.29□□□□□ -0.44
PCNX4-204ENST00000406949 ARHGAP24Q8N264 748 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 BANPQ8N9N5 519 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 GSDMBQ8TAX9 411 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 B2RBV5 119 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 CCDC22O60826 627 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 OAS1P00973 400 aaKnown RBP12.29□□□□□ -0.44
PCNX4-204ENST00000406949 SRGAP2BP0DMP2 458 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 NCAM1P13591 858 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 NUMBP49757 651 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 GTF2A2P52657 109 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 AQP5P55064 265 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 TPI1P60174 286 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 SOWAHAQ2M3V2 549 aa12.29□□□□□ -0.44
PCNX4-204ENST00000406949 OLFML1Q6UWY5 402 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms