RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 FGFR3P22607 806 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 RXRBP28702 533 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 TMEM62Q0P6H9 643 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 MYBPC3Q14896 1274 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ZNF699Q32M78 642 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 IL31Q6EBC2 164 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 CAND1Q86VP6 1230 aaKnown RBP9.89□□□□□ -0.83
SMC1B-202ENST00000404354 SAMD3Q8N6K7 520 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 PIWIL2Q8TC59 973 aaKnown RBP9.89□□□□□ -0.83
SMC1B-202ENST00000404354 GRIN3AQ8TCU5 1115 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ERLEC1Q96DZ1 483 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 TWNKQ96RR1 684 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 SEMA6AQ9H2E6 1030 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ANKEF1Q9NU02 776 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 FIS1Q9Y3D6 152 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 PSAT1Q9Y617 370 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 SYNJ2BP-COX16A0A087WUM0 186 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 SDR42E2A6NKP2 422 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 KRT38O76015 456 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ITGA2BP08514 1039 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 NUDT2P50583 147 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 CHN2P52757 468 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ATXN1P54253 815 aaKnown RBP9.89□□□□□ -0.83
SMC1B-202ENST00000404354 CA9Q16790 459 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 TEX44Q53QW1 395 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 FAM219BQ5XKK7 198 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 PDPK2PQ6A1A2 396 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 MAVSQ7Z434 540 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 LRRC71Q8N4P6 559 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ADPGKQ9BRR6 497 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 COX16Q9P0S2 106 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 WDR27A2RRH5 827 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 GOLGA8TH3BQL2 631 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 H3BSA7 217 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 APOC4-APOC2K7ER74 178 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 TPP1O14773 563 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 DGAT1O75907 488 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 APOC2P02655 101 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ENO3P13929 434 aaPredicted RBP9.89□□□□□ -0.83
SMC1B-202ENST00000404354 PDGFRAP16234 1089 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ALDH1A3P47895 512 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 JAK3P52333 1124 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 BCAR1P56945 870 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ACTR2P61160 394 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 KRT76Q01546 638 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 MAP3K10Q02779 954 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 FSTL1Q12841 308 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 LGSNQ5TDP6 509 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 TMC7Q7Z402 723 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 APLFQ8IW19 511 aaPredicted RBP9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ARHGAP18Q8N392 663 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 METTL25Q8N6Q8 603 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 SNX31Q8N9S9 440 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 TFB1MQ8WVM0 346 aaKnown RBP9.89□□□□□ -0.83
SMC1B-202ENST00000404354 C7orf26Q96N11 449 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 OLFM3Q96PB7 478 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 POPDC2Q9HBU9 364 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ANLNQ9NQW6 1124 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 PXMP2Q9NR77 195 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 SEPT10Q9P0V9 454 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 BTBD7Q9P203 1132 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ARHGAP28Q9P2N2 729 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 FEM1BQ9UK73 627 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 ZNF711Q9Y462 761 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 COMMD3-BMI1R4GMX3 469 aa9.89□□□□□ -0.83
SMC1B-202ENST00000404354 M0QYV0 167 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 CSPG5O95196 566 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 TBXAS1P24557 533 aaPredicted RBP9.88□□□□□ -0.83
SMC1B-202ENST00000404354 NXNQ6DKJ4 435 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 KLHDC10Q6PID8 442 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 AMIGO2Q86SJ2 522 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 TTC13Q8NBP0 860 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 ATP6V0A1Q93050 837 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 ATG4CQ96DT6 458 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 NTPCRQ9BSD7 190 aaKnown RBP9.88□□□□□ -0.83
SMC1B-202ENST00000404354 MRPL1Q9BYD6 325 aaKnown RBP9.88□□□□□ -0.83
SMC1B-202ENST00000404354 MIS12Q9H081 205 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 SIRPGQ9P1W8 387 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 HSFX1Q9UBD0 423 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 MFHAS1Q9Y4C4 1052 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 TCRBV5S1A1TA0A578 114 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 SLC15A5A6NIM6 579 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 USP12O75317 370 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 FKBP6O75344 327 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 APOEP02649 317 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 ASLP04424 464 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 HNRNPCP07910 306 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMC1B-202ENST00000404354 ITGAXP20702 1163 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 DLG2Q15700 870 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 TEDDM1Q5T9Z0 273 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 TMCO4Q5TGY1 634 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 PRAMEF18Q5VWM3 479 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 TMEM192Q8IY95 271 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 ZFP28Q8NHY6 868 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 RAB3IL1Q8TBN0 382 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 PPP4R1Q8TF05 950 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 TMEM216Q9P0N5 145 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 CEP350Q5VT06 3117 aa9.88□□□□□ -0.83
SMC1B-202ENST00000404354 ZBTB14O43829 449 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms