RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LOC105369274A0A096LPK9 316 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 LOC102723532A0A0G2JNH3 316 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 FAM90A20PA6NIJ5 464 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 H0YIZ8 118 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 KIAA0355O15063 1070 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 PRAMEF2O60811 474 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 HEXIM1O94992 359 aaKnown RBP4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 TK1P04183 234 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 ATP1A3P13637 1013 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 CD19P15391 556 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 TNFAIP3P21580 790 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 CXCR5P32302 372 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 DIO1P49895 249 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 CCR5P51681 352 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 RBM5P52756 815 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 RAE1P78406 368 aaKnown RBP4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 LMOD3Q0VAK6 560 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 FOXI1Q12951 378 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 BMPR2Q13873 1038 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 PTPRRQ15256 657 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 LY6G5CQ5SRR4 150 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 KIAA1324Q6UXG2 1013 aaKnown RBP4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 OR4N4Q8N0Y3 316 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 BEND2Q8NDZ0 799 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 CLEC4CQ8WTT0 213 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 NPIPB3Q92617 1050 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 USP13Q92995 863 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 REXO5Q96IC2 774 aaKnown RBP4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 TTPALQ9BTX7 342 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 ALG8Q9BVK2 526 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 HERC2P3Q9BVR0 1158 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 ZNF341Q9BYN7 854 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 UBA5Q9GZZ9 404 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 ZCWPW1Q9H0M4 648 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 ABHD16BQ9H3Z7 469 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 USP29Q9HBJ7 922 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 FBXO28Q9NVF7 368 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 PDP2Q9P2J9 529 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 MGAT4CQ9UBM8 478 aa4.42□□□□□ -1.7
HMGB1P17-201ENST00000403495 NPIPB8E9PQR5 432 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 MPPED1O15442 326 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 SUV39H1O43463 412 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 URI1O94763 535 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 ADRA1DP25100 572 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 LIFRP42702 1097 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 PAPOLAP51003 745 aaKnown RBP4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 RPL15P61313 204 aaKnown RBP4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 KCNJ12Q14500 433 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 PTPAQ15257 358 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 ST3GAL2Q16842 350 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 ZNF484Q5JVG2 852 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 MIIPQ5JXC2 388 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 ZNF569Q5MCW4 686 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 TEDDM1Q5T9Z0 273 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 KIAA0895LQ68EN5 471 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 KIRREL2Q6UWL6 708 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 NAPRTQ6XQN6 538 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 Q6YL49 198 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 PRRT2Q7Z6L0 340 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 TMEM57Q8N5G2 664 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 SIRT6Q8N6T7 355 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 IL17REQ8NFR9 667 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 LINS1Q8NG48 757 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 HERVK_113Q902F9 699 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 CPT1BQ92523 772 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 RSC1A1Q92681 617 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 MPP4Q96JB8 637 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 VPS50Q96JG6 964 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 TBATAQ96M53 351 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 TWSG1Q9GZX9 223 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 PLEKHA2Q9HB19 425 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 G6PC2Q9NQR9 355 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 DUSP22Q9NRW4 184 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 GABRQQ9UN88 632 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 ZBTB1Q9Y2K1 713 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 RRP7AQ9Y3A4 280 aaKnown RBP4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 PCDHA10Q9Y5I2 948 aa4.41□□□□□ -1.7
HMGB1P17-201ENST00000403495 A0A1B0GVC2 190 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 A8MVJ9 347 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 EFCAB8A8MWE9 144 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 MGST3O14880 152 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 RHOBTB3O94955 611 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 NXPH3O95157 252 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 MBPP02686 304 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 CPA1P15085 419 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 GALNSP34059 522 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 ADRA1BP35368 520 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 MPLP40238 635 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 COPB1P53618 953 aaKnown RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 SUMO2P61956 95 aaKnown RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 MRPS35P82673 323 aaKnown RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 LMAN2Q12907 356 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 TDGQ13569 410 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 SMAD1Q15797 465 aaKnown RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 AAK1Q2M2I8 961 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 SPATS1Q496A3 300 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 RNASE12Q5GAN4 147 aaKnown RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 PTCHD4Q6ZW05 846 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 PARS2Q7L3T8 475 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms