RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.65■□□□□ 0.26
HMGA1-204ENST00000401473 MARCH2Q9P0N8 246 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 EPS15L1Q9UBC2 864 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 CPQQ9Y646 472 aa16.65■□□□□ 0.26
HMGA1-204ENST00000401473 MYOFQ9NZM1 2061 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 NUP210Q8TEM1 1887 aaPredicted RBP16.64■□□□□ 0.25
HMGA1-204ENST00000401473 TMEM191CA6NGB0 347 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 MSI1O43347 362 aaKnown RBP16.64■□□□□ 0.25
HMGA1-204ENST00000401473 DAB1O75553 588 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 TMEM253P0C7T8 217 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 MBL2P11226 248 aaPredicted RBP16.64■□□□□ 0.25
HMGA1-204ENST00000401473 PDGFRAP16234 1089 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 WEE1P30291 646 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 OTUD1Q5VV17 481 aaPredicted RBP16.64■□□□□ 0.25
HMGA1-204ENST00000401473 CTNNBL1Q8WYA6 563 aaPredicted RBP16.64■□□□□ 0.25
HMGA1-204ENST00000401473 ACSF2Q96CM8 615 aaPredicted RBP16.64■□□□□ 0.25
HMGA1-204ENST00000401473 NPY6RQ99463 290 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 LACRTQ9GZZ8 138 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 NACA2Q9H009 215 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 TRPV4Q9HBA0 871 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 OSGEPQ9NPF4 335 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 PRKAG3Q9UGI9 489 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 ZMYM5Q9UJ78 669 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 ZFP37Q9Y6Q3 630 aaPredicted RBP16.64■□□□□ 0.25
HMGA1-204ENST00000401473 DUSP10Q9Y6W6 482 aa16.64■□□□□ 0.25
HMGA1-204ENST00000401473 HELZP42694 1942 aaKnown RBP16.63■□□□□ 0.25
HMGA1-204ENST00000401473 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 TRUB2O95900 331 aaKnown RBP16.63■□□□□ 0.25
HMGA1-204ENST00000401473 IGLV3-25P01717 112 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 ZNF252P-AS1Q0IIN9 211 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 C15orf59Q2T9L4 293 aaPredicted RBP16.63■□□□□ 0.25
HMGA1-204ENST00000401473 SLC25A52Q3SY17 297 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 DCUN1D2Q6PH85 259 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 TAC4Q86UU9 113 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 SLC35G2Q8TBE7 412 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 CDK5RAP1Q96SZ6 601 aaKnown RBP16.63■□□□□ 0.25
HMGA1-204ENST00000401473 NUP85Q9BW27 656 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 PLA2G2FQ9BZM2 168 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 SMOC2Q9H3U7 446 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 OLA1Q9NTK5 396 aaKnown RBP16.63■□□□□ 0.25
HMGA1-204ENST00000401473 LIMD1Q9UGP4 676 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 RASAL2Q9UJF2 1139 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 SALL4Q9UJQ4 1053 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 INTUQ9ULD6 942 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 ARHGAP26Q9UNA1 814 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 ADGRG1Q9Y653 693 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 GREM1O60565 184 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 ATXN1P54253 815 aaKnown RBP16.63■□□□□ 0.25
HMGA1-204ENST00000401473 ATP11AP98196 1134 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 BNIPLQ7Z465 357 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 TADA2BQ86TJ2 420 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 TDRD5Q8NAT2 981 aaKnown RBP16.63■□□□□ 0.25
HMGA1-204ENST00000401473 TTC16Q8NEE8 873 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 RSAD2Q8WXG1 361 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 BTBD6Q96KE9 485 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 TBCBQ99426 244 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 TRIM62Q9BVG3 475 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 MRPL47Q9HD33 250 aaKnown RBP16.63■□□□□ 0.25
HMGA1-204ENST00000401473 NR2E1Q9Y466 385 aa16.63■□□□□ 0.25
HMGA1-204ENST00000401473 SLC12A8A0AV02 714 aa16.62■□□□□ 0.25
HMGA1-204ENST00000401473 ANHXE9PGG2 379 aa16.62■□□□□ 0.25
HMGA1-204ENST00000401473 M0QYT0 321 aa16.62■□□□□ 0.25
HMGA1-204ENST00000401473 LEFTY2O00292 366 aa16.62■□□□□ 0.25
HMGA1-204ENST00000401473 HMBSP08397 361 aa16.62■□□□□ 0.25
HMGA1-204ENST00000401473 SH3RF2Q8TEC5 729 aa16.62■□□□□ 0.25
HMGA1-204ENST00000401473 ZFP14Q9HCL3 533 aa16.62■□□□□ 0.25
HMGA1-204ENST00000401473 SCINQ9Y6U3 715 aa16.62■□□□□ 0.25
HMGA1-204ENST00000401473 SYNJ2BP-COX16A0A087WUM0 186 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 SCAMP3O14828 347 aaKnown RBP16.61■□□□□ 0.25
HMGA1-204ENST00000401473 STC2O76061 302 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 IPO7O95373 1038 aaKnown RBP16.61■□□□□ 0.25
HMGA1-204ENST00000401473 KLKB1P03952 638 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 ZNF143P52747 638 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-204ENST00000401473 KRT83P78385 493 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 NME3Q13232 169 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 ARFGAP1Q8N6T3 406 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 CELF5Q8N6W0 485 aaKnown RBP16.61■□□□□ 0.25
HMGA1-204ENST00000401473 CENPIQ92674 756 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-204ENST00000401473 SLC39A13Q96H72 371 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 PIGVQ9NUD9 493 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 DDIT4Q9NX09 232 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 COX16Q9P0S2 106 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 CTTNBP2NLQ9P2B4 639 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 NUMBLQ9Y6R0 609 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 CUL9Q8IWT3 2517 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 F5P12259 2224 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 HEPACAM2A8MVW5 462 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 IRAK2O43187 625 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 ENDOD1O94919 500 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 ASGR2P07307 311 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 GPD1P21695 349 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 SDC4P31431 198 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 VAV2P52735 878 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 COG7P83436 770 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 HTR4Q13639 388 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 ZNF77Q15935 545 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 CDO1Q16878 200 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 VITQ6UXI7 678 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 ZDHHC14Q8IZN3 488 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 PLCD3Q8N3E9 789 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms