RNA–Protein interactions for RNA: ENST00000400777.7

CASP9-204, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-204ENST00000400777 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.78■□□□□ 0.28
CASP9-204ENST00000400777 COL4A4P53420 1690 aaPredicted RBP16.77■□□□□ 0.28
CASP9-204ENST00000400777 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 PI4K2BG5E9Z4 385 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 MDM4O15151 490 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 IRAK2O43187 625 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 EFEMP1Q12805 493 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 MSANTD2Q6P1R3 559 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 ELMSAN1Q6PJG2 1045 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 TADA2BQ86TJ2 420 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 RCOR2Q8IZ40 523 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 RASGEF1CQ8N431 466 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 KCTD6Q8NC69 237 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 ACTRT1Q8TDG2 376 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 TEKT4Q8WW24 435 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 RAPGEF5Q92565 580 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 RNF34Q969K3 372 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 PPP2R3CQ969Q6 453 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 SNRNP25Q9BV90 132 aaKnown RBP16.77■□□□□ 0.27
CASP9-204ENST00000400777 WDCPQ9H6R7 721 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 ZNF334Q9HCZ1 680 aaPredicted RBP16.77■□□□□ 0.27
CASP9-204ENST00000400777 SMARCAL1Q9NZC9 954 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 PLXNA3P51805 1871 aa16.77■□□□□ 0.27
CASP9-204ENST00000400777 PGRMC1O00264 195 aaKnown RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 MSI1O43347 362 aaKnown RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 FGGP02679 453 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 HOXA9P31269 272 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 CETN2P41208 172 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 CKAP4Q07065 602 aaKnown RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 EIF4EBP2Q13542 120 aaPredicted RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 DUSP6Q16828 381 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 LRIT3Q3SXY7 679 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 PABPC1LQ4VXU2 614 aaKnown RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 HECTD3Q5T447 861 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 CMASQ8NFW8 434 aaPredicted RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 NACA2Q9H009 215 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 MYO16Q9Y6X6 1858 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 A0A1W2PPC1 479 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 PDE2AO00408 941 aaPredicted RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 RIOK3O14730 519 aaKnown RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 TADA3O75528 432 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 GABRR2P28476 465 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 CCR1P32246 355 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 CXCR3P49682 368 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 AIF1P55008 147 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 LLGL1Q15334 1064 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 ARL13BQ3SXY8 428 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 ZC3H12AQ5D1E8 599 aaKnown RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 MFSD7Q6UXD7 560 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 TMEM150AQ86TG1 271 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 MIB1Q86YT6 1006 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 ZNF276Q8N554 614 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 CEP112Q8N8E3 955 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 CORO1BQ9BR76 489 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 CARD6Q9BX69 1037 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 IL21Q9HBE4 155 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 ASAH2Q9NR71 780 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 GPATCH2LQ9NWQ4 482 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 MARCH2Q9P0N8 246 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 TTC7AQ9ULT0 858 aaPredicted RBP16.76■□□□□ 0.27
CASP9-204ENST00000400777 AP4E1Q9UPM8 1137 aa16.76■□□□□ 0.27
CASP9-204ENST00000400777 GREB1Q4ZG55 1949 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 XYLBO75191 536 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 F11P03951 625 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 HNRNPA1P09651 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
CASP9-204ENST00000400777 KDELR1P24390 212 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 ADRA1BP35368 520 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 ATP5C1P36542 298 aaKnown RBP16.75■□□□□ 0.27
CASP9-204ENST00000400777 TUBP50607 506 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 CDH6P55285 790 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 KRT81Q14533 505 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 CLUL1Q15846 466 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 LONRF2Q1L5Z9 754 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 TMC8Q8IU68 726 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 MAP7D3Q8IWC1 876 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 HS6ST3Q8IZP7 471 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 NTAN1Q96AB6 310 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 NAP1L3Q99457 506 aaPredicted RBP16.75■□□□□ 0.27
CASP9-204ENST00000400777 CDCA3Q99618 268 aaPredicted RBP16.75■□□□□ 0.27
CASP9-204ENST00000400777 CALN1Q9BXU9 219 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 TKTL2Q9H0I9 626 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 DHX35Q9H5Z1 703 aaKnown RBP16.75■□□□□ 0.27
CASP9-204ENST00000400777 TMEM51Q9NW97 253 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 ZDHHC7Q9NXF8 308 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 RASAL2Q9UJF2 1139 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 FZD10Q9ULW2 581 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 TLR6Q9Y2C9 796 aa16.75■□□□□ 0.27
CASP9-204ENST00000400777 CD48P09326 243 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 COPS2P61201 443 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 RBM10P98175 930 aaKnown RBP16.74■□□□□ 0.27
CASP9-204ENST00000400777 DPYSL2Q16555 572 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 CA9Q16790 459 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 TFDP3Q5H9I0 405 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 PPP6R3Q5H9R7 873 aaPredicted RBP16.74■□□□□ 0.27
CASP9-204ENST00000400777 EFHC2Q5JST6 749 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 ZNF697Q5TEC3 545 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 KLHDC10Q6PID8 442 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 SPOCD1Q6ZMY3 1216 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 GAREM2Q75VX8 874 aa16.74■□□□□ 0.27
CASP9-204ENST00000400777 PSTKQ8IV42 348 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms