RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 MGAT4AQ9UM21 535 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 SH3BP1Q9Y3L3 701 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 GPC6Q9Y625 555 aaPredicted RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 ALG6Q9Y672 507 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 TRIM49D1C9J1S8 452 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 MSH3P20585 1137 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 PEX3P56589 373 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 COPZ1P61923 177 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 ZRANB3Q5FWF4 1079 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 RNF19BQ6ZMZ0 732 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 RASSF6Q6ZTQ3 369 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 NEDD1Q8NHV4 660 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 DPF2Q92785 391 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 THUMPD3Q9BV44 507 aaKnown RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 ROGDIQ9GZN7 287 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 CLK4Q9HAZ1 481 aaKnown RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 PRRG1O14668 218 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 KPNA6O60684 536 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 ATG7O95352 703 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 CNPP09543 421 aaKnown RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 STAT3P40763 770 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 CLCN2P51788 898 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 POU5F1Q01860 360 aaKnown RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 MPP2Q14168 576 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 TMC3Q7Z5M5 1100 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 SIRT2Q8IXJ6 389 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 SLC25A23Q9BV35 468 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 NUAK2Q9H093 628 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 LSM7Q9UK45 103 aaKnown RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 FAM50BQ9Y247 325 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 ZBTB39O15060 712 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 UPP2O95045 317 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 ACLYP53396 1101 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 C5orf22Q49AR2 442 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 SPATA2LQ8IUW3 424 aaPredicted RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 EDC3Q96F86 508 aaKnown RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 BTBD9Q96Q07 612 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 KLHL11Q9NVR0 708 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 BARHL2Q9NY43 387 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 PFDN2Q9UHV9 154 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 ANKRD6Q9Y2G4 727 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 KCNN4O15554 427 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 SNX3O60493 162 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 GCP02774 474 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 PCSK2P16519 638 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 AQP5P55064 265 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 TBCELQ5QJ74 424 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 PYHIN1Q6K0P9 492 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 LRRC70Q7Z2Q7 622 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 PID1Q7Z2X4 250 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 RDM1Q8NG50 284 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 BLOC1S5Q8TDH9 187 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 MAP3K14Q99558 947 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 ABI2Q9NYB9 513 aaPredicted RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 RAB26Q9ULW5 256 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 PRPF19Q9UMS4 504 aaKnown RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 CLDN3O15551 220 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 OR6B1O95007 311 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 MPOP05164 745 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 PACS1Q6VY07 963 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 STRA8Q7Z7C7 330 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 C8orf59Q8N0T1 100 aaPredicted RBP8.6□□□□□ -1.03
CHD8-201ENST00000399982 TRPV3Q8NET8 790 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 FUCA2Q9BTY2 467 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 TMEM5Q9Y2B1 443 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 SLC30A1Q9Y6M5 507 aa8.6□□□□□ -1.03
CHD8-201ENST00000399982 PXDNLA1KZ92 1463 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 UBE2QL1A1L167 161 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 UMPSP11172 480 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 UBA1P22314 1058 aaKnown RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 ZNF844Q08AG5 666 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 TRAF2Q12933 501 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 OCLNQ16625 522 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 PDPK2PQ6A1A2 396 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 SAMD3Q8N6K7 520 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 MAB21L3Q8N8X9 362 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 GPR63Q9BZJ6 419 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 C6orf62Q9GZU0 229 aaPredicted RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 RAB6BQ9NRW1 208 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 MARCOQ9UEW3 520 aaPredicted RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 MAGEB16A2A368 324 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 SEC24AO95486 1093 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 EYA4O95677 639 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 APRTP07741 180 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 CPA3P15088 417 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 RAG1P15918 1043 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 ALOX12P18054 663 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 FBLN1P23142 703 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 RCVRNP35243 200 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 FMO5P49326 533 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 DRG2P55039 364 aaKnown RBP8.59□□□□□ -1.03
CHD8-201ENST00000399982 CCNG2Q16589 344 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 RNF44Q7L0R7 432 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 CDK20Q8IZL9 346 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 DEFB107AQ8IZN7 70 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 C18orf8Q96DM3 657 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 CCDC115Q96NT0 180 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 JMJD4Q9H9V9 463 aa8.59□□□□□ -1.03
CHD8-201ENST00000399982 TCF7L2Q9NQB0 619 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms