RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 LPIN1Q14693 890 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 CYB5R4Q7L1T6 521 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 EPM2AIP1Q7L775 607 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 GUF1Q8N442 669 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 BBS4Q96RK4 519 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 HIPK3Q9H422 1215 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 SOAT2O75908 522 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 IL10P22301 178 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 DSG3P32926 999 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 CAP2P40123 477 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 BOP1Q14137 746 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 C6orf118Q5T5N4 469 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 CDH24Q86UP0 819 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 TMEM159Q96B96 161 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 MTMR4Q9NYA4 1195 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 DCTN4Q9UJW0 460 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 CRYL1Q9Y2S2 319 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 GOLGA8TH3BQL2 631 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 OR10H2O60403 315 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 CLDND1Q9NY35 253 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 HEMK1Q9Y5R4 338 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 SNCAIPQ9Y6H5 919 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 C1orf54Q8WWF1 131 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 KRT35Q92764 455 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 PRMT6Q96LA8 375 aaPredicted RBP11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 FAM96AQ9H5X1 160 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 CEP72Q9P209 647 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 SUCOQ9UBS9 1254 aaKnown RBP11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 PVALEFA0A1B0GWK0 134 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 CCL16O15467 120 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 POLBP06746 335 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 CCDC130P13994 396 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 ADCY2Q08462 1091 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 BIKQ13323 160 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 EPHA10Q5JZY3 1008 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 CDK20Q8IZL9 346 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 CLEC4FQ8N1N0 589 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 TINF2Q9BSI4 451 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 WDR35Q9P2L0 1181 aa11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 DIS3Q9Y2L1 958 aaKnown RBP11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 MRPL42Q9Y6G3 142 aaKnown RBP11.27□□□□□ -0.6
CACNA1C-216ENST00000399638 PODXLO00592 558 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 SMNDC1O75940 238 aaKnown RBP eCLIP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 PDX1P52945 283 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 NFE2Q16621 373 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 RARS2Q5T160 578 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 CXCL17Q6UXB2 119 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 GALNT4Q8N4A0 578 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 RSPH1Q8WYR4 309 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 NT5MQ9NPB1 228 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 ABHD10Q9NUJ1 306 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 SH3GLB1Q9Y371 365 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 ZNF839A8K0R7 811 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 LGALS16A8MUM7 142 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 FAM25AB3EWG3 89 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 FAM25CB3EWG5 89 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 FAM25GB3EWG6 89 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 H3BRB1 525 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 TK2O00142 265 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 XPO1O14980 1071 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 EXTL3O43909 919 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 GMFGO60234 142 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 GTF2H1P32780 548 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 TUFMP49411 452 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 POU5F1Q01860 360 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 SNRNP35Q16560 246 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 AAK1Q2M2I8 961 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 OTOAQ7RTW8 1153 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 OR8H2Q8N162 312 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 NAT16Q8N8M0 369 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 RAB6BQ9NRW1 208 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 TRIM49BA6NDI0 452 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 PRODHO43272 600 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 IGKV5-2P06315 115 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 ELNP15502 786 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 CES1P23141 567 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 GEMP55040 296 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 SMTNL2Q2TAL5 461 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 RAET1GQ6H3X3 334 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 LRIG3Q6UXM1 1119 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 REXO1L1PQ8IX06 675 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 LGI2Q8N0V4 545 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 TMA16Q96EY4 203 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 MRPL48Q96GC5 212 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 L1RE1Q9UN81 338 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 PRR36Q9H6K5 1346 aa11.27□□□□□ -0.61
CACNA1C-216ENST00000399638 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
CACNA1C-216ENST00000399638 CSDE1O75534 798 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-216ENST00000399638 MFN2O95140 757 aa11.26□□□□□ -0.61
CACNA1C-216ENST00000399638 ABCB1P08183 1280 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms