RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 OTOAQ7RTW8 1153 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 VPS37AQ8NEZ2 397 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 ERP27Q96DN0 273 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 MANSC1Q9H8J5 431 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 GSNP06396 782 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 COILP38432 576 aaPredicted RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 GLRBP48167 497 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 PRIM2P49643 509 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 PRPF18Q99633 342 aaKnown RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 MIR1-1HGQ9H1L0 117 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 TCF3P15923 654 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PPM1AP35813 382 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 GEMP55040 296 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 ALFQ53S48 1182 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 IYDQ6PHW0 289 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PLPPR4Q7Z2D5 763 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 CATSPER1Q8NEC5 780 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 ATG4AQ8WYN0 398 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 NT5MQ9NPB1 228 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 GTF2A1LQ9UNN4 478 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 MOXD2PA6NHM9 499 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 A8MX80 341 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PPP1R3GB7ZBB8 358 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 SUPT7LO94864 414 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 KRT8P05787 483 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 ITGB6P18564 788 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 SERPINB4P48594 390 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 FAM83EQ2M2I3 478 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PGS1Q32NB8 556 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 OTOP1Q7RTM1 612 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 TFAP2DQ7Z6R9 452 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 SLFN11Q7Z7L1 901 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 RBM23Q86U06 439 aaKnown RBP14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 APBB2Q92870 758 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 THUMPD3Q9BV44 507 aaKnown RBP14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PHRF1Q9P1Y6 1649 aaKnown RBP14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 MMP3P08254 477 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 GRK3P35626 688 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 TRPC1P48995 793 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 TKTL1P51854 596 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 ANGPT1Q15389 498 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 TPGS1Q6ZTW0 290 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PRUNE1Q86TP1 453 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 TC2NQ8N9U0 490 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 E2F7Q96AV8 911 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PAWRQ96IZ0 340 aaKnown RBP14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 ECSITQ9BQ95 431 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 UBXN6Q9BZV1 441 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 EPN3Q9H201 632 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PORCNQ9H237 461 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 IARS2Q9NSE4 1012 aaKnown RBP14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 GID8Q9NWU2 228 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PDZK1P1A8MUH7 402 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 SCNN1BP51168 640 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 CENPCQ03188 943 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 ACOX1Q15067 660 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 LBX2Q6XYB7 198 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 TRMT11Q7Z4G4 463 aaKnown RBP14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 CYP4F12Q9HCS2 524 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 DYRK1BQ9Y463 629 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 TLL2Q9Y6L7 1015 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 RPS6KL1Q9Y6S9 549 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 UMODL1Q5DID0 1318 aa14.66□□□□□ -0.06
PCDHA11-201ENST00000398640 CCL5P13501 91 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 MRPL28Q13084 256 aaKnown RBP14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 GIT2Q14161 759 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 FAM172AQ8WUF8 416 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 USP15Q9Y4E8 981 aaPredicted RBP14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 RPTORQ8N122 1335 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 MTSS1O43312 755 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 GJB1P08034 283 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 GEMIN4P57678 1058 aaKnown RBP14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 SLC39A12Q504Y0 691 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 MDM1Q8TC05 714 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 SKA1Q96BD8 255 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 OSBPL10Q9BXB5 764 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 SLC45A1Q9Y2W3 748 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 B2RBV5 119 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 TRIM49D1C9J1S8 452 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 SERPINI2O75830 405 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 APOA1P02647 267 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 ASGR1P07306 291 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 PKN1Q16512 942 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 DNAL1Q4LDG9 190 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 NOMO2Q5JPE7 1267 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 BRI3BPQ8WY22 251 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 MAML3Q96JK9 1138 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 PDGFCQ9NRA1 345 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 BCAT1P54687 386 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 LRRC8BQ6P9F7 803 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 CCDC81Q6ZN84 652 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 CBWD1Q9BRT8 395 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 IFRD1O00458 451 aaPredicted RBP14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 ACKR2O00590 384 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 PPP1R37O75864 691 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 VDRP11473 427 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 CD52P31358 61 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 FBXW10Q5XX13 1052 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms