RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 NDRG1Q92597 394 aaKnown RBP13.35□□□□□ -0.27
VPREB3-202ENST00000398465 EDEM1Q92611 657 aa13.35□□□□□ -0.27
VPREB3-202ENST00000398465 EZH1Q92800 747 aaPredicted RBP13.35□□□□□ -0.27
VPREB3-202ENST00000398465 ERGIC2Q96RQ1 377 aa13.35□□□□□ -0.27
VPREB3-202ENST00000398465 PNKPQ96T60 521 aa13.35□□□□□ -0.27
VPREB3-202ENST00000398465 FBRSL1Q9HCM7 1045 aaKnown RBP13.35□□□□□ -0.27
VPREB3-202ENST00000398465 WDR35Q9P2L0 1181 aa13.35□□□□□ -0.27
VPREB3-202ENST00000398465 CYTH4Q9UIA0 394 aa13.35□□□□□ -0.27
VPREB3-202ENST00000398465 SIK3Q9Y2K2 1263 aa13.35□□□□□ -0.27
VPREB3-202ENST00000398465 MUC22E2RYF6 1773 aaPredicted RBP13.35□□□□□ -0.27
VPREB3-202ENST00000398465 NYNRINQ9P2P1 1898 aaKnown RBP13.34□□□□□ -0.27
VPREB3-202ENST00000398465 SPAG17Q6Q759 2223 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 SLC12A8A0AV02 714 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 PIK3R2O00459 728 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 PAPSS1O43252 624 aaPredicted RBP13.34□□□□□ -0.27
VPREB3-202ENST00000398465 LSM8O95777 96 aaKnown RBP13.34□□□□□ -0.27
VPREB3-202ENST00000398465 CAVIN2O95810 425 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 IGLV3-27P01718 113 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 APODP05090 189 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 HOXA6P31267 233 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
VPREB3-202ENST00000398465 KRT9P35527 623 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 ZNF165P49910 485 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 SNX16P57768 344 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 RING1Q06587 406 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 SYCP1Q15431 976 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 ANO4Q32M45 955 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 HSF5Q4G112 596 aaPredicted RBP13.34□□□□□ -0.27
VPREB3-202ENST00000398465 NUGGCQ68CJ6 796 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 PASD1Q8IV76 773 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 FMNL3Q8IVF7 1028 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 DHX40Q8IX18 779 aaKnown RBP13.34□□□□□ -0.27
VPREB3-202ENST00000398465 PHTF2Q8N3S3 785 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 ZBTB44Q8NCP5 570 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 C1orf131Q8NDD1 294 aaKnown RBP13.34□□□□□ -0.27
VPREB3-202ENST00000398465 EPS8L1Q8TE68 723 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 SERPINB11Q96P15 392 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 BBS2Q9BXC9 721 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 MIS12Q9H081 205 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 ARHGEF4Q9NR80 690 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 FAM207AQ9NSI2 230 aaPredicted RBP13.34□□□□□ -0.27
VPREB3-202ENST00000398465 ASNSD1Q9NWL6 643 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 ZSCAN32Q9NX65 697 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 STOML2Q9UJZ1 356 aa13.34□□□□□ -0.27
VPREB3-202ENST00000398465 SYCE3A1L190 88 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 NEDD8-MDP1E9PL57 170 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 K7ESF4 209 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 LILRB5O75023 590 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 TULP3O75386 442 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 KAT7O95251 611 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 PENKP01210 267 aaPredicted RBP13.33□□□□□ -0.28
VPREB3-202ENST00000398465 KLKB1P03952 638 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 GLI1P08151 1106 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 ATP1A3P13637 1013 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 TYRP14679 529 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 CDK11BP21127 795 aaKnown RBP13.33□□□□□ -0.28
VPREB3-202ENST00000398465 GRIA2P42262 883 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 HARS2P49590 506 aaKnown RBP13.33□□□□□ -0.28
VPREB3-202ENST00000398465 JAM2P57087 298 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 SKOR2Q2VWA4 1001 aaPredicted RBP13.33□□□□□ -0.28
VPREB3-202ENST00000398465 TOGARAM2Q6ZUX3 1019 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 SYT13Q7L8C5 426 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 ZNF677Q86XU0 584 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 TMEM25Q86YD3 366 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 SCUBE3Q8IX30 993 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 TERB1Q8NA31 727 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 NEK11Q8NG66 645 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 RPLP0P6Q8NHW5 317 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 NKD2Q969F2 451 aaPredicted RBP13.33□□□□□ -0.28
VPREB3-202ENST00000398465 FAM149B1Q96BN6 582 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 PPP1R13BQ96KQ4 1090 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 XPO6Q96QU8 1125 aaKnown RBP13.33□□□□□ -0.28
VPREB3-202ENST00000398465 CPXM1Q96SM3 734 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 PHOX2BQ99453 314 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 IRX2Q9BZI1 471 aaPredicted RBP13.33□□□□□ -0.28
VPREB3-202ENST00000398465 POPDC2Q9HBU9 364 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 DEC1Q9P2X7 70 aa13.33□□□□□ -0.28
VPREB3-202ENST00000398465 AGO1Q9UL18 857 aaKnown RBP13.33□□□□□ -0.28
VPREB3-202ENST00000398465 MYO18AQ92614 2054 aaKnown RBP13.32□□□□□ -0.28
VPREB3-202ENST00000398465 A0A0A0MRY4 1105 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 CCDC163A0A0D9SF12 145 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 PRR23AA6NEV1 266 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 K7EQS6 105 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 MSI1O43347 362 aaKnown RBP13.32□□□□□ -0.28
VPREB3-202ENST00000398465 HSF2BPO75031 334 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 FYNP06241 537 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 HMBSP08397 361 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
VPREB3-202ENST00000398465 NCAM1P13591 858 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 SOX5P35711 763 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 KLK7P49862 253 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 MRE11P49959 708 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 POLR2FP61218 127 aaKnown RBP13.32□□□□□ -0.28
VPREB3-202ENST00000398465 MRPS21P82921 87 aaKnown RBP13.32□□□□□ -0.28
VPREB3-202ENST00000398465 UBXN1Q04323 297 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 KDSRQ06136 332 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
VPREB3-202ENST00000398465 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms