RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 AAR2Q9Y312 384 aaKnown RBP8.57□□□□□ -1.04
PTPRD-204ENST00000397606 ADAMTS4O75173 837 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 CHRNA1P02708 482 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 TROVE2P10155 538 aaKnown RBP eCLIP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 C6orf163Q5TEZ5 329 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 KLC3Q6P597 504 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 CRELD2Q6UXH1 353 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 POLNQ7Z5Q5 900 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 IRGQQ8WZA9 623 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 PCED1BQ96HM7 432 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 GDAP2Q9NXN4 497 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 SLC25A13Q9UJS0 675 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 PHIPQ8WWQ0 1821 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 FAM155AB1AL88 458 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 FGF10O15520 208 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 TLR5O60602 858 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 STAU1O95793 577 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 TKTP29401 623 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 OR1E1P30953 314 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 PREPLQ4J6C6 727 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 MFSD7Q6UXD7 560 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 APTXQ7Z2E3 356 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 KDELC2Q7Z4H8 507 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 PPM1NQ8N819 430 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 ATG4AQ8WYN0 398 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 CPXM1Q96SM3 734 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 PFDN4Q9NQP4 134 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 INTS9Q9NV88 658 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 SPAG6O75602 509 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 PYGMP11217 842 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 CHKAP35790 457 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 SDHAF4Q5VUM1 108 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 TRMT10CQ7L0Y3 403 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 LGI2Q8N0V4 545 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 IPMKQ8NFU5 416 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 ZFATQ9P243 1243 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 OR12D3Q9UGF7 316 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 MYBPHLA2RUH7 354 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 RARAP10276 462 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 LRPAP1P30533 357 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 PLA2G4AP47712 749 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 AIF1P55008 147 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 RPL7AP62424 266 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 ZC3H12AQ5D1E8 599 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 SMYD5Q6GMV2 418 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 PLEKHA7Q6IQ23 1121 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 STRADAQ7RTN6 431 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 CRYBG2Q8N1P7 616 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 XPO6Q96QU8 1125 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 CYTH2Q99418 400 aa8.56□□□□□ -1.04
PTPRD-204ENST00000397606 ZC3H7BQ9UGR2 993 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.56□□□□□ -1.04
PTPRD-204ENST00000397606 TMEM191CA6NGB0 347 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 HMGB1P1B2RPK0 211 aaPredicted RBP8.55□□□□□ -1.04
PTPRD-204ENST00000397606 CAPN15O75808 1086 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 BAIAP3O94812 1187 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 KDELR1P24390 212 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 ATP1A2P50993 1020 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 VSNL1P62760 191 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 ARHGEF7Q14155 803 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 PCSK7Q16549 785 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 SLC25A52Q3SY17 297 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 BRMS1LQ5PSV4 323 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 TPGS2Q68CL5 300 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 LRRC8CQ8TDW0 803 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 FNIP1Q8TF40 1166 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 FGD4Q96M96 766 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 STRA6Q9BX79 667 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 CNOT10Q9H9A5 744 aaKnown RBP8.55□□□□□ -1.04
PTPRD-204ENST00000397606 NOCTQ9UK39 431 aaKnown RBP8.55□□□□□ -1.04
PTPRD-204ENST00000397606 STBD1O95210 358 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 MAP3K6O95382 1288 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 GSTA1P08263 222 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 GSTA2P09210 222 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 CSF2RAP15509 400 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 LMO2P25791 158 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 CCT5P48643 541 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 RENBPP51606 427 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 SLC5A3P53794 718 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 VCPP55072 806 aaKnown RBP8.55□□□□□ -1.04
PTPRD-204ENST00000397606 TAF10Q12962 218 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 STAT4Q14765 748 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 HP1BP3Q5SSJ5 553 aaPredicted RBP8.55□□□□□ -1.04
PTPRD-204ENST00000397606 CCDC121Q6ZUS5 278 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 SLC26A9Q7LBE3 791 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 GSPT2Q8IYD1 628 aaKnown RBP8.55□□□□□ -1.04
PTPRD-204ENST00000397606 NOA1Q8NC60 698 aaKnown RBP8.55□□□□□ -1.04
PTPRD-204ENST00000397606 TRPV1Q8NER1 839 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 TOX2Q96NM4 488 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 TCF25Q9BQ70 676 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 DPEP3Q9H4B8 488 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 PLA2G4CQ9UP65 541 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 APOC4-APOC2K7ER74 178 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 CBX4O00257 560 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 APOC2P02655 101 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 CYP1A1P04798 512 aaPredicted RBP8.55□□□□□ -1.04
PTPRD-204ENST00000397606 AMPD1P23109 780 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 NDUFV1P49821 464 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 ITGA8P53708 1063 aa8.55□□□□□ -1.04
PTPRD-204ENST00000397606 SFSWAPQ12872 951 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms