RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ALCAMQ13740 583 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 MDH1BQ5I0G3 518 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 SNX30Q5VWJ9 437 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 GRAMD4Q6IC98 578 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 DYMQ7RTS9 669 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 ADAT2Q7Z6V5 191 aaKnown RBP9.98□□□□□ -0.81
NEDD9-203ENST00000397378 GATAD2AQ86YP4 633 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 NUP93Q8N1F7 819 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 RASSF8Q8NHQ8 419 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 C1orf216Q8TAB5 229 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 TSC1Q92574 1164 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 ELOVL4Q9GZR5 314 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 OLFML3Q9NRN5 406 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 TMEM30AQ9NV96 361 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 SEPT3Q9UH03 358 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 PCDHB13Q9Y5F0 798 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 SLCO1B1Q9Y6L6 691 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 GOLGA8IPA6NC78 632 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 GOLGA8JA6NMD2 632 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 WASH3PC4AMC7 463 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 TULP1O00294 542 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-203ENST00000397378 GFRA2O00451 464 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 CACNG3O60359 315 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 TACC1O75410 805 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 RTN3O95197 1032 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-203ENST00000397378 GCNT3O95395 438 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 TNNC2P02585 160 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 ACADMP11310 421 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 YWHAQP27348 245 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 OXTRP30559 389 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 GNL1P36915 607 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-203ENST00000397378 GRIA4P48058 902 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 TPMTP51580 245 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 CACNA2D1P54289 1103 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 GRIN1Q05586 938 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 STARD3Q14849 445 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 SURF1Q15526 300 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 DUOXA2Q1HG44 320 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 FUT11Q495W5 492 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 HECTD3Q5T447 861 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 KDM7AQ6ZMT4 941 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 HS2ST1Q7LGA3 356 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
NEDD9-203ENST00000397378 CACUL1Q86Y37 369 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 TMEM25Q86YD3 366 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 BBS7Q8IWZ6 715 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 GPD1LQ8N335 351 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 OR5B17Q8NGF7 314 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 SNRNP27Q8WVK2 155 aaKnown RBP9.97□□□□□ -0.81
NEDD9-203ENST00000397378 DNAJC19Q96DA6 116 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 HIC2Q96JB3 615 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 ZNF578Q96N58 590 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-203ENST00000397378 MMS19Q96T76 1030 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 CBWD1Q9BRT8 395 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 NUP58Q9BVL2 599 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 TM9SF3Q9HD45 589 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 ITM2CQ9NQX7 267 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 DNAJC17Q9NVM6 304 aaKnown RBP9.97□□□□□ -0.81
NEDD9-203ENST00000397378 IL37Q9NZH6 218 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 STK17AQ9UEE5 414 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 SH3BP1Q9Y3L3 701 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 NME7Q9Y5B8 376 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 PTPRJQ12913 1337 aa9.97□□□□□ -0.81
NEDD9-203ENST00000397378 AFPP02771 609 aaKnown RBP9.96□□□□□ -0.82
NEDD9-203ENST00000397378 ITGAVP06756 1048 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 ZDHHC11BP0C7U3 371 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 PTPN1P18031 435 aaKnown RBP9.96□□□□□ -0.82
NEDD9-203ENST00000397378 CR2P20023 1033 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 ABCB4P21439 1286 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 CCR10P46092 362 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 CASP5P51878 434 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 SERINC3Q13530 473 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 HTR3DQ70Z44 454 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 FAM124AQ86V42 546 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 SYCP3Q8IZU3 236 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 EID2Q8N6I1 236 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 PRCCQ92733 491 aaPredicted RBP9.96□□□□□ -0.82
NEDD9-203ENST00000397378 FBXO32Q969P5 355 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 XPO6Q96QU8 1125 aaKnown RBP9.96□□□□□ -0.82
NEDD9-203ENST00000397378 MRPL45Q9BRJ2 306 aaKnown RBP9.96□□□□□ -0.82
NEDD9-203ENST00000397378 ZNF518BQ9C0D4 1074 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 MKRN2Q9H000 416 aaKnown RBP9.96□□□□□ -0.82
NEDD9-203ENST00000397378 SNX25Q9H3E2 840 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 MARK1Q9P0L2 795 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 TBC1D7Q9P0N9 293 aa9.96□□□□□ -0.82
NEDD9-203ENST00000397378 A0A1B0GTQ1 180 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 FAM92AA1XBS5 289 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 FRMD3A2A2Y4 597 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 ZNF233A6NK53 670 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 PRRT4C9JH25 899 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 H3BQV1 296 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 K7ENP7 123 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 PAPSS1O43252 624 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-203ENST00000397378 DFNA5O60443 496 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 MPOP05164 745 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 CTSKP43235 329 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 ZNF132P52740 706 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 IFRD2Q12894 506 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-203ENST00000397378 KCNT1Q5JUK3 1230 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 INO80CQ6PI98 192 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms