RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 IGFBP6P24592 240 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-205ENST00000397017 GDF10P55107 478 aa15.74■□□□□ 0.11
MCF2L-205ENST00000397017 STAT4Q14765 748 aa15.74■□□□□ 0.11
MCF2L-205ENST00000397017 DPY19L2P1Q6NXN4 242 aa15.74■□□□□ 0.11
MCF2L-205ENST00000397017 GPATCH11Q8N954 259 aa15.74■□□□□ 0.11
MCF2L-205ENST00000397017 TTC25Q96NG3 672 aa15.74■□□□□ 0.11
MCF2L-205ENST00000397017 HIPK3Q9H422 1215 aa15.74■□□□□ 0.11
MCF2L-205ENST00000397017 MARCOQ9UEW3 520 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-205ENST00000397017 IQANK1A0A1B0GTG1 560 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 SERPINB6P35237 376 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 CDKN2BP42772 138 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 EPHB1P54762 984 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 PITX1P78337 314 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 POU5F1BQ06416 359 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 THOC5Q13769 683 aaKnown RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 BTG3Q14201 252 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 FAM187BQ17R55 369 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 ZNF449Q6P9G9 518 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 COLGALT1Q8NBJ5 622 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 USP6NLQ92738 828 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 WNT8BQ93098 351 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 ZNF669Q96BR6 464 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 CYTH2Q99418 400 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 CNOT10Q9H9A5 744 aaKnown RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 OR12D3Q9UGF7 316 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 GIT1Q9Y2X7 761 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 RRP15Q9Y3B9 282 aaKnown RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 CHRNA1P02708 482 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 KRT4P19013 534 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 MRPS5P82675 430 aaKnown RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 MAPRE1Q15691 268 aaKnown RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 ZNF280DQ6N043 979 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 TRPV1Q8NER1 839 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 RUBCNQ92622 972 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 PRDM12Q9H4Q4 367 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 PCDH18Q9HCL0 1135 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 FGFR1OP2Q9NVK5 253 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 QSER1Q2KHR3 1735 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 ZNF296Q8WUU4 475 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 SREK1Q8WXA9 508 aaKnown RBP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.73■□□□□ 0.11
MCF2L-205ENST00000397017 TBC1D31Q96DN5 1066 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 PCDH9Q9HC56 1237 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 PCMTD2Q9NV79 361 aa15.73■□□□□ 0.11
MCF2L-205ENST00000397017 TSPAN3O60637 253 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 DUSP4Q13115 394 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 PTK7Q13308 1070 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 VEPH1Q14D04 833 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 ZRSR2Q15696 482 aaKnown RBP15.72■□□□□ 0.11
MCF2L-205ENST00000397017 OTOP2Q7RTS6 562 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 MAML1Q92585 1016 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 MPP6Q9NZW5 540 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 EIF3HO15372 352 aaKnown RBP eCLIP15.72■□□□□ 0.111e-6■■□□□ 12.9
MCF2L-205ENST00000397017 NOS2P35228 1153 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 MNAT1P51948 309 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 COPS2P61201 443 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 TMPRSS15P98073 1019 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 DNAJC3Q13217 504 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 DPYSL3Q14195 570 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 RCN2Q14257 317 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 SLC24A5Q71RS6 500 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 FUKQ8N0W3 1084 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 SMG8Q8ND04 991 aaKnown RBP15.72■□□□□ 0.11
MCF2L-205ENST00000397017 HSFY1Q96LI6 401 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 NRDE2Q9H7Z3 1164 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 RPS6KL1Q9Y6S9 549 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 UNCXA6NJT0 531 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 AGPSO00116 658 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 BEST1O76090 585 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 TKTP29401 623 aaKnown RBP15.72■□□□□ 0.11
MCF2L-205ENST00000397017 ERFP50548 548 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 LRIG3Q6UXM1 1119 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 LBHD1Q9BQE6 289 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-205ENST00000397017 IL1RAPL1Q9NZN1 696 aa15.72■□□□□ 0.11
MCF2L-205ENST00000397017 PHIPQ8WWQ0 1821 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 ARHGAP42A6NI28 874 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 C2CD4BA6NLJ0 364 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 RNF103O00237 685 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 TYK2P29597 1187 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 BBS12Q6ZW61 710 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 LRRC8DQ7L1W4 858 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 TMCO2Q7Z6W1 182 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-205ENST00000397017 ZNF280BQ86YH2 543 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 RMDN1Q96DB5 314 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 PPP1R36Q96LQ0 422 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 TMEM209Q96SK2 561 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 BCO2Q9BYV7 579 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 ETNK1Q9HBU6 452 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 AGTP01019 485 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 TROVE2P10155 538 aaKnown RBP eCLIP15.71■□□□□ 0.11
MCF2L-205ENST00000397017 ERCC2P18074 760 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 PROZP22891 400 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 MATKP42679 507 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 TUBP50607 506 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 PTK6Q13882 451 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 HIC1Q14526 733 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 MTFR1Q15390 333 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 CCDC6Q16204 474 aa15.71■□□□□ 0.11
MCF2L-205ENST00000397017 NFE2Q16621 373 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-205ENST00000397017 KLHL38Q2WGJ6 581 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms