RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 SYT11Q9BT88 431 aa30.66■■■□□ 2.5
CHCHD4-202ENST00000396914 C1QTNF1Q9BXJ1 281 aa30.66■■■□□ 2.5
CHCHD4-202ENST00000396914 DCLK3Q9C098 648 aa30.66■■■□□ 2.5
CHCHD4-202ENST00000396914 FAM204AQ9H8W3 233 aa30.66■■■□□ 2.5
CHCHD4-202ENST00000396914 CALB1P05937 261 aa30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 SOX9P48436 509 aa30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 HARS2P49590 506 aaKnown RBP30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 ADKP55263 362 aaKnown RBP30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 CDK17Q00537 523 aa30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 PRKCQQ04759 706 aa30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 NR1H3Q13133 447 aa30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 PHF13Q86YI8 300 aaPredicted RBP30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 KIAA1958Q8N8K9 716 aa30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 SERPINB11Q96P15 392 aa30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 ECT2Q9H8V3 914 aa30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 KIF26AQ9ULI4 1882 aaPredicted RBP30.65■■■□□ 2.5
CHCHD4-202ENST00000396914 SYNJ2BP-COX16A0A087WUM0 186 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 DAB1O75553 588 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 PDGFBP01127 241 aaPredicted RBP30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 TBX4P57082 545 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 HGSNATQ68CP4 663 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 PPP1R2P3Q6NXS1 205 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 TAC4Q86UU9 113 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 DENND1CQ8IV53 801 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 MRFAP1L1Q96HT8 127 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 SLC2A13Q96QE2 648 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 TAS2R14Q9NYV8 317 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 COX16Q9P0S2 106 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 CUL9Q8IWT3 2517 aa30.64■■■□□ 2.5
CHCHD4-202ENST00000396914 PLEKP08567 350 aaPredicted RBP30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 CD72P21854 359 aa30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 TRIP4Q15650 581 aaPredicted RBP30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 DRC7Q8IY82 874 aa30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 OTUB2Q96DC9 234 aa30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 C8orf33Q9H7E9 229 aaPredicted RBP30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 TBC1D17Q9HA65 648 aa30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 METTL5Q9NRN9 209 aaKnown RBP30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 WDR35Q9P2L0 1181 aa30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 ZNF510Q9Y2H8 683 aa30.64■■■□□ 2.49
CHCHD4-202ENST00000396914 OTOL1A6NHN0 477 aaPredicted RBP30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 AKR1B15C9JRZ8 316 aaPredicted RBP30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 DDX3XO00571 662 aaKnown RBP eCLIP30.63■■■□□ 2.497e-18■■■■■ 66.3
CHCHD4-202ENST00000396914 MFAP3LO75121 409 aa30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 TRUB2O95900 331 aaKnown RBP30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 SCNN1AP37088 669 aa30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 TMEM31Q5JXX7 168 aa30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 CNGA4Q8IV77 575 aa30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 ADGRG2Q8IZP9 1017 aa30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 ABHD10Q9NUJ1 306 aa30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 ADAMTS1Q9UHI8 967 aa30.63■■■□□ 2.49
CHCHD4-202ENST00000396914 SPECC1L-ADORA2AF8WAN1 911 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 GBP1P32455 592 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 NOS2P35228 1153 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 C1QBPQ07021 282 aaKnown RBP30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 ZNF852Q6ZMS4 543 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 MON1BQ7L1V2 547 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 FAM3CQ92520 227 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 RNF34Q969K3 372 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 DNAJC7Q99615 494 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 SELENOOQ9BVL4 669 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 DDIT4Q9NX09 232 aa30.62■■■□□ 2.49
CHCHD4-202ENST00000396914 MAN2B1O00754 1011 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 GREM1O60565 184 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 ADH1CP00326 375 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 KLKB1P03952 638 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 GLULP15104 373 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 MATKP42679 507 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 PITX1P78337 314 aaPredicted RBP30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 AMPD2Q01433 879 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 PTP4A2Q12974 167 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 NME3Q13232 169 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 UBXN2BQ14CS0 331 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 DHCR24Q15392 516 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 UNC45BQ8IWX7 931 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 DEF6Q9H4E7 631 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 AGO1Q9UL18 857 aaKnown RBP30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 STAP1Q9ULZ2 295 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 NDRG2Q9UN36 371 aaKnown RBP30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 TLR6Q9Y2C9 796 aa30.61■■■□□ 2.49
CHCHD4-202ENST00000396914 COL4A3Q01955 1670 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 FTLP02792 175 aaPredicted RBP30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 CYP17A1P05093 508 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 CTHP32929 405 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 SULT1E1P49888 294 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 STARD6P59095 220 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 TBX2Q13207 712 aaPredicted RBP30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 ANO4Q32M45 955 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 LY6G5CQ5SRR4 150 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 NUGGCQ68CJ6 796 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 Q6ZNB5 142 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 TPGS1Q6ZTW0 290 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 RALGPS2Q86X27 583 aaPredicted RBP30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 DNAAF5Q86Y56 855 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 MCOLN2Q8IZK6 566 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 OLIG1Q8TAK6 271 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 MSANTD3Q96H12 275 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 ARHGAP20Q9P2F6 1191 aa30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 MRPS17Q9Y2R5 130 aaKnown RBP30.6■■■□□ 2.49
CHCHD4-202ENST00000396914 TECTAO75443 2155 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms