RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SF3A1Q15459 793 aaKnown RBP8.9□□□□□ -0.98
SCFD1-202ENST00000396629 TEAD4Q15561 434 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 WDR72Q3MJ13 1102 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 LARP1BQ659C4 914 aaKnown RBP8.9□□□□□ -0.98
SCFD1-202ENST00000396629 PCSK4Q6UW60 755 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 RBBP8NLQ8NC74 664 aaPredicted RBP8.9□□□□□ -0.98
SCFD1-202ENST00000396629 EPSTI1Q96J88 318 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 FCRL3Q96P31 734 aaPredicted RBP8.9□□□□□ -0.98
SCFD1-202ENST00000396629 TM9SF3Q9HD45 589 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 CYLDQ9NQC7 956 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 TLR8Q9NR97 1041 aaKnown RBP8.9□□□□□ -0.98
SCFD1-202ENST00000396629 PLXNA2O75051 1894 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 CFAP46Q8IYW2 2715 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 CAPN8A6NHC0 703 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 H0Y8X5 98 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 RRP8O43159 456 aaKnown RBP8.9□□□□□ -0.99
SCFD1-202ENST00000396629 SYNCRIPO60506 623 aaKnown RBP8.9□□□□□ -0.99
SCFD1-202ENST00000396629 PENKP01210 267 aaPredicted RBP8.9□□□□□ -0.99
SCFD1-202ENST00000396629 ACADMP11310 421 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 CDK4P11802 303 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 ATP5C1P36542 298 aaKnown RBP8.9□□□□□ -0.99
SCFD1-202ENST00000396629 MFAP3P55082 362 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 TNNC1P63316 161 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 GOLGA8FQ08AF8 430 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 GOLGA8DPQ0D2H9 430 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 E2F5Q15329 346 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 GEN1Q17RS7 908 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 C6orf118Q5T5N4 469 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 USP49Q70CQ1 688 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 SV2BQ7L1I2 683 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 ZMIZ2Q8NF64 920 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 SNIP1Q8TAD8 396 aaKnown RBP8.9□□□□□ -0.99
SCFD1-202ENST00000396629 UCMAQ8WVF2 138 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 SMARCD1Q96GM5 515 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 SMOQ99835 787 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 NRSN2Q9GZP1 204 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 FBXO44Q9H4M3 255 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 C6orf106Q9H6K1 298 aaPredicted RBP8.9□□□□□ -0.99
SCFD1-202ENST00000396629 KIAA1586Q9HCI6 787 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 CSNK1G1Q9HCP0 422 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 FTSJ1Q9UET6 329 aa8.9□□□□□ -0.99
SCFD1-202ENST00000396629 KCNK3O14649 394 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 DFNA5O60443 496 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 C1SP09871 688 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 ATICP31939 592 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 CTSKP43235 329 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 PLA2G4AP47712 749 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 CDH8P55286 799 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 CFHR1Q03591 330 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 ZNF234Q14588 700 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 INAVAQ3KP66 663 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 CCDC157Q569K6 752 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 KCNT1Q5JUK3 1230 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 FYB2Q5VWT5 728 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 KLHDC10Q6PID8 442 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 GPR155Q7Z3F1 870 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 FUKQ8N0W3 1084 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 PIWIL1Q96J94 861 aaKnown RBP8.89□□□□□ -0.99
SCFD1-202ENST00000396629 CGRRF1Q99675 332 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 MED10Q9BTT4 135 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 XYLT2Q9H1B5 865 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 OSER1Q9NX31 292 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 ELOVL2Q9NXB9 296 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 PLK2Q9NYY3 685 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 HSPBP1Q9NZL4 362 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 CCDC39Q9UFE4 941 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-202ENST00000396629 MAST4O15021 2626 aa8.89□□□□□ -0.99
SCFD1-202ENST00000396629 ENC1O14682 589 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 TSPAN3O60637 253 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 AP1G2O75843 785 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 BEST1O76090 585 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 JUPP14923 745 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 PRKCHP24723 683 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 ACSL1P33121 698 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 HNF1BP35680 557 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 MYL6P60660 151 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 PSMD6Q15008 389 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 RRAGBQ5VZM2 374 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 FAM124AQ86V42 546 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 OR2T3Q8NH03 318 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 SNX19Q92543 992 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 BAP1Q92560 729 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 ZNF516Q92618 1163 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 BHMTQ93088 406 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 VRTNQ9H8Y1 702 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 PANK4Q9NVE7 773 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 SCML2Q9UQR0 700 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 ZNF510Q9Y2H8 683 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 ZNF462Q96JM2 2506 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 A0A1B0GTQ1 180 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 H3BQV1 296 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 STC2O76061 302 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 IDEP14735 1019 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 TNNI1P19237 187 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 CD27P26842 260 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 HOXD13P35453 343 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 SEMG2Q02383 582 aa8.88□□□□□ -0.99
SCFD1-202ENST00000396629 CAMK2GQ13555 558 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-202ENST00000396629 EIF4HQ15056 248 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms